pybedtools-bin_0.8.0-1_all.deb


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Description

pybedtools-bin - Scripts produced for pybedtools

Property Value
Distribution Ubuntu 19.04 (Disco Dingo)
Repository Ubuntu Universe amd64
Package filename pybedtools-bin_0.8.0-1_all.deb
Package name pybedtools-bin
Package version 0.8.0
Package release 1
Package architecture all
Package type deb
Category universe/python
Homepage https://daler.github.io/pybedtools/
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 11.29 KB
Installed size 52.00 KB
The BEDTools suite of programs is widely used for genomic interval
manipulation or “genome algebra”. pybedtools wraps and extends BEDTools and
offers feature-level manipulations from within Python.
This package provides scripts that are executable with the
Python 3 version of this package.

Alternatives

Package Version Architecture Repository
pybedtools-bin_0.8.0-1_all.deb 0.8.0 all Ubuntu Universe
pybedtools-bin - - -

Requires

Name Value
python3-pybedtools -
python3:any -

Download

Type URL
Mirror archive.ubuntu.com
Binary Package pybedtools-bin_0.8.0-1_all.deb
Source Package python-pybedtools

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install pybedtools-bin deb package:
    # sudo apt-get install pybedtools-bin

Files

Path
/usr/bin/annotate.py
/usr/bin/intersection_matrix.py
/usr/bin/intron_exon_reads.py
/usr/bin/pbt_plotting_example.py
/usr/bin/peak_pie.py
/usr/bin/pybedtools
/usr/bin/venn_gchart.py
/usr/bin/venn_mpl.py
/usr/share/doc/pybedtools-bin/changelog.Debian.gz
/usr/share/doc/pybedtools-bin/copyright
/usr/share/lintian/overrides/pybedtools-bin

Changelog

2019-01-19 - Steffen Moeller <moeller@debian.org>
python-pybedtools (0.8.0-1) unstable; urgency=medium
* New upstream version.
* d/control:
- Standards-Version: 4.3.0
- No Python2 packages
- Vcs links adapted for new home on salsa.d.o
* d/copyright
- adjusted paths for LGPL 2.1 files
- added notion of GPL-2 (not later) files, credits for spotting
those go to Thorsten Alteholz
Created issue https://github.com/daler/pybedtools/issues/271
proposing to homogenize that licensing.
2018-06-13 - Steffen Moeller <moeller@debian.org>
python-pybedtools (0.7.10-2.1) REMOVED; urgency=medium
* Removed from unstable and testing, see
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=894299
2017-11-09 - Andreas Tille <tille@debian.org>
python-pybedtools (0.7.10-2) unstable; urgency=medium
* Team upload
* Add back test_issue_178 after upstream provided a patch
2017-11-08 - Andreas Tille <tille@debian.org>
python-pybedtools (0.7.10-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Build-Depends: python3-all-dev (Thanks for the hint to Adrian Bunk
<bunk@debian.org>)
Closes: #868927
* Standards-Version: 4.1.1 (no changes needed)
* do not uselessly parse d/changelog
* hardening
* Exclude test test_issue_178 since it fails for strange reasons (to be
clarified with upstream)
2017-01-14 - Michael R. Crusoe <michael.crusoe@gmail.com>
python-pybedtools (0.7.8-1) unstable; urgency=medium
* Initial release. (Closes: #851358)

See Also

Package Description
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pybik_3.0-3build1_all.deb Rubik's cube game
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pybind11-doc_2.2.4-2_all.deb documentation for pybind11
pybit-client_1.0.0-4_all.deb buildd client support for pybit
pybit-common_1.0.0-4_all.deb Common objects for pybit
pybit-svn_1.0.0-4_all.deb Subversion post commit hook for pybit
pybit-watcher_1.0.0-4_all.deb watches incoming directories for reprepro
pybit-web_1.0.0-4_all.deb buildd toolkit based on message queues (web frontend)
pyblosxom_1.5.3-3_all.deb lightweight file-based weblog system written in Python
pybootchartgui_0+r141-0ubuntu6_amd64.deb boot sequence visualisation
pybridge-common_0.3.0-7.2_all.deb Common files for pybridge
pybridge-server_0.3.0-7.2_all.deb Server files for pybridge
pybridge_0.3.0-7.2_all.deb An online contract bridge game. Gtk client
pybtctool_1.1.42-1_all.deb command interface for Bitcoin signatures and transactions
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