perlprimer-doc_1.2.4-1_all.deb


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Description

perlprimer-doc - Tutorial to perlprimer

Property Value
Distribution Ubuntu 19.04 (Disco Dingo)
Repository Ubuntu Universe amd64
Package filename perlprimer-doc_1.2.4-1_all.deb
Package name perlprimer-doc
Package version 1.2.4
Package release 1
Package architecture all
Package type deb
Category universe/science
Homepage http://perlprimer.sourceforge.net
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 239.22 KB
Installed size 285.00 KB
PerlPrimer is a free, open-source GUI application written in Perl that designs
primers for standard Polymerase Chain Reaction (PCR), bisulphite PCR,
real-time PCR (QPCR) and sequencing. It aims to automate and simplify the
process of primer design.
If operated online, the tool nicely communicates with the Ensembl
project for further insights into the gene structure, i.e., allowing
for taking the location of exons and introns into account for the design
of the primers.  The sequences themselves can be retrieved, too.
An HTML tutorial explaining the use of the user interface and
utilisation of online resources.

Alternatives

Package Version Architecture Repository
perlprimer-doc_1.2.4-1_all.deb 1.2.4 all Ubuntu Universe
perlprimer-doc - - -

Download

Type URL
Mirror archive.ubuntu.com
Binary Package perlprimer-doc_1.2.4-1_all.deb
Source Package perlprimer

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install perlprimer-doc deb package:
    # sudo apt-get install perlprimer-doc

Files

Path
/usr/share/doc-base/perlprimer
/usr/share/doc/perlprimer/tutorial.html
/usr/share/doc/perlprimer-doc/changelog.Debian.gz
/usr/share/doc/perlprimer-doc/copyright
/usr/share/doc/perlprimer/tutorial_files/egfp_c1_mcs.png
/usr/share/doc/perlprimer/tutorial_files/egfp_n2_mcs.png
/usr/share/doc/perlprimer/tutorial_files/ensembl_20.png
/usr/share/doc/perlprimer/tutorial_files/img1.png
/usr/share/doc/perlprimer/tutorial_files/img10.png
/usr/share/doc/perlprimer/tutorial_files/img2.png
/usr/share/doc/perlprimer/tutorial_files/img3.png
/usr/share/doc/perlprimer/tutorial_files/img4.png
/usr/share/doc/perlprimer/tutorial_files/img5.png
/usr/share/doc/perlprimer/tutorial_files/img6.png
/usr/share/doc/perlprimer/tutorial_files/img7.png
/usr/share/doc/perlprimer/tutorial_files/img8.png
/usr/share/doc/perlprimer/tutorial_files/img9.png
/usr/share/doc/perlprimer/tutorial_files/magnify.png
/usr/share/doc/perlprimer/tutorial_files/open_dna_20.png
/usr/share/doc/perlprimer/tutorial_files/preferences_20.png
/usr/share/doc/perlprimer/tutorial_files/report_20.png
/usr/share/doc/perlprimer/tutorial_files/sflogo.png

Changelog

2019-02-13 - Charles Plessy <plessy@debian.org>
perlprimer (1.2.4-1) unstable; urgency=medium
[ Charles Plessy ]
* QA-build with Salsa.
* New upstream version 1.2.4
* Conforms to Policy version 4.3.0
[ Steffen Moeller ]
* debian/upstream/metadata:
- Added references to registries
- yamllint cleanliness
- added reference to Methods paper.
* Bumped policy from 3.9.8 to 4.1.0 (no changes)
[ Andreas Tille ]
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.0
2017-01-22 - Charles Plessy <plessy@debian.org>
perlprimer (1.2.3-1) unstable; urgency=medium
00b28ba New upstream version 1.2.3, closes: #708477.
840bfa2 Simplify packaging as .pl suffix was dropped upstream.
90fbf5e Delete patches, applied upstream.
f700242 Remove outdated Watch field in d/u/metadata.
d35bd09 Removed Debhelper file d/perlprimer-doc.dirs (implicit).
c37612a Adapt d/perlprimer.docs to upstream changes.
6ae70e7 Use HTTPS URL for debian/copyright.
a066529 Minor format update of the gbp configuration file.
7cdcd1e Update icon to display full size and be specific to PerlPrimer.
2016-12-12 - Andreas Tille <tille@debian.org>
perlprimer (1.1.21-4) unstable; urgency=medium
* Provide SVG icon for menu
Closes: #708480
* Do not explicitly mention quilt in README.source
* debhelper 10
* replace cdbs by dh
* d/watch: version=4
2016-07-02 - Canberk Koç <canberkkoc@gmail.com>
perlprimer (1.1.21-3) unstable; urgency=medium
* Team upload
[ James McCoy ]
8803540 Move debian/upstream to debian/upstream/metadata
[ Charles Plessy ]
9c04256 Delete mailcap file; rely on the conversion from the FreeDesktop
file instead.
9e25964 tutorial.html: remove remote link (potential privacy breach).
038a4d0 debian/source/options: set single-debian-patch to modify upstream
files directly.
[ Canberk Koç ]
* debian/patches/fixarray.patch: Array error fixed
LP: 1575074
[ Andreas Tille ]
* cme fix dpkg-control
* remove menu file
* fix spelling
* Enhance desktop file
2014-01-25 - Charles Plessy <plessy@debian.org>
perlprimer (1.1.21-2) unstable; urgency=medium
[ Steffen Moeller ]
8f8aacf Fixed a series of errors indicated by current Perl.
[ Charles Plessy ]
5655f4e Use Debhelper 9.
f923d80 Normalised VCS URLs.
2cc95e8 Normalised debian/control with cme
2cc95e8 Removed DM-Upload-Allowed field
2cc95e8 Conforms with latest Policy.
232a761 Added keywords to the FreeDesktop menu entry.
2011-11-25 - Charles Plessy <plessy@debian.org>
perlprimer (1.1.21-1) unstable; urgency=low
0b963e8 New upstream release restoring Ensembl compatibility.
b212da5 Removed 10-perlprimer.diff, applied upstream, and whole patch system
ec6fcdf Corrected VCS-Git URL in debian/control.
fa968ca Mark the use of git-buildpackage by adding its configuration file.
ab18a22 Complies with Policy 3.9.2 (no changes needed).
bdb7ebb Corrected and normalised Debian copyright file with config-edit.
2011-02-27 - Charles Plessy <plessy@debian.org>
perlprimer (1.1.20-1) unstable; urgency=low
* New upstream release:
- Ensembl compatibility restored again,
- Error corrected in calculation of melting temperature.
* Source package maintained with Git (debian/control).
* Switch to format 3.0 (quilt) to use pristine upstream bzipped archive.
* Incremented Standards-Version to 3.9.1 indicate conformance with the
latest Policy (debian/control, no changes needed).
* debian/copyright updated and reformatted to DEP-5 format.
* Using Debhelper 8 (debian/control, debian/compat).
* Added instructions and data for testing (test.ppr, README.test).

See Also

Package Description
perlprimer_1.2.4-1_all.deb Graphical design of primers for PCR
perlrdf_0.004-3_all.deb RDF command line utils
perltidy_20180220-1_all.deb Perl script indenter and reformatter
perm_0.4.0-4_amd64.deb efficient mapping of short reads with periodic spaced seeds
persepolis_3.0.1-1_all.deb Graphical download manager based on Aria2
persistent-cache-cpp-dev_1.0.4+16.10.20160823-0ubuntu4_amd64.deb Cache of key-value pairs with persistent storage for C++ 11
persistent-cache-cpp-doc_1.0.4+16.10.20160823-0ubuntu4_all.deb Documentation for persistent-cache-cpp-dev
peruse-common_1.2+dfsg+20181001-1_all.deb common files for peruse
peruse_1.2+dfsg+20181001-1_amd64.deb comic book reader for KDE
pescetti_0.5-4_all.deb Bridge Pseudo-duplimate generator
pesign_0.112-4_amd64.deb Signing utility for UEFI binaries
petit_1.1.1-1_all.deb log analysis tool for syslog, apache and raw log files
petitboot-twin_13.05.29.14.00-g4dc604b-1ubuntu2_amd64.deb Twin GUI version of petitboot, a kexec based bootloader
petitboot_13.05.29.14.00-g4dc604b-1ubuntu2_amd64.deb ncurses version of petitboot, a kexec based bootloader
petname_2.7-0ubuntu1_all.deb generate pronouncable, perhaps even memorable, pet names
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