norsp_1.0.6-4_all.deb


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Description

norsp - predictor of non-regular secondary structure

Property Value
Distribution Ubuntu 19.04 (Disco Dingo)
Repository Ubuntu Universe amd64
Package filename norsp_1.0.6-4_all.deb
Package name norsp
Package version 1.0.6
Package release 4
Package architecture all
Package type deb
Category universe/science
Homepage https://rostlab.org/owiki/index.php/NORSp_-_predictor_of_NOn-Regular_Secondary_Structure
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 277.15 KB
Installed size 1.54 MB
NORSp is a publicly available predictor for disordered regions in proteins.
Specifically, it predicts long regions with no regular secondary structure.
Upon submission of a protein sequence, NORSp analyses the protein about its
secondary structure, the presence of transmembrane helices and coiled-coils.
It then returns the presence and position of disordered regions.
NORSp can be useful for biologists in several ways. For example,
crystallographers can check whether their proteins contain NORS regions and
make the decision about whether to proceed with the experiments since NORS
proteins may be difficult to crystallise, as demonstrated by the their low
occurrence in PDB. Biologists interested in protein structure-function
relationship may also find it interesting to verify whether the
protein-protein interaction sites coincide with NORS regions.

Alternatives

Package Version Architecture Repository
norsp_1.0.6-4_all.deb 1.0.6 all Ubuntu Universe
norsp - - -

Requires

Name Value
perl:any -

Download

Type URL
Mirror archive.ubuntu.com
Binary Package norsp_1.0.6-4_all.deb
Source Package norsp

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install norsp deb package:
    # sudo apt-get install norsp

Files

Path
/usr/bin/norsp
/usr/share/doc/norsp/changelog.Debian.gz
/usr/share/doc/norsp/copyright
/usr/share/doc/norsp/examples/query.coils
/usr/share/doc/norsp/examples/query.coils_raw
/usr/share/doc/norsp/examples/query.fasta
/usr/share/doc/norsp/examples/query.hssp
/usr/share/doc/norsp/examples/query.nors.gz
/usr/share/doc/norsp/examples/query.phdHtm
/usr/share/doc/norsp/examples/query.prof
/usr/share/doc/norsp/examples/query.sumNors
/usr/share/man/man1/norsp.1.gz

Changelog

2018-10-18 - Andreas Tille <tille@debian.org>
norsp (1.0.6-4) unstable; urgency=medium
* pp-popularity-contest only suggested
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
2017-11-16 - Andreas Tille <tille@debian.org>
norsp (1.0.6-3) unstable; urgency=medium
* Moved packaging from SVN to Git
* debhelper 10
* Standards-Version: 4.1.1
2016-01-08 - Andreas Tille <tille@debian.org>
norsp (1.0.6-2) unstable; urgency=medium
* Add myself to Uploaders
* Moved debian/upstream to debian/upstream/metadata
* cme fix dpkg-control
* Priority: optional
* debhelper 9
* DEP5
2013-09-30 - Laszlo Kajan <lkajan@rostlab.org>
norsp (1.0.6-1) unstable; urgency=low
* New upstream release (Closes: #724117): FTBFS: POD errors.
2012-08-14 - Laszlo Kajan <lkajan@rostlab.org>
norsp (1.0.5-1) unstable; urgency=low
* New upstream release (Closes: #684856) 
2012-07-13 - Eva Reisinger <e.reisinger@gmx.net>
norsp (1.0.4-1) unstable; urgency=low
* Initial release (Closes: #680367) 
2011-10-27 - Laszlo Kajan <lkajan@rostlab.org>
norsp (1.0.3) unstable; urgency=low
* recommends now on ncoils (>= 2002-3) 
2011-02-28 - Laszlo Kajan <lkajan@rostlab.org>
norsp (1.0.2) unstable; urgency=low
* warning when popcon not installed
2011-02-18 - Laszlo Kajan <lkajan@rostlab.org>
norsp (1.0.1) unstable; urgency=low
* popularity contest
* bugzilla new url
2010-12-23 - Guy Yachdav <gyachdav@rostlab.org>
norsp (1.0.0) unstable; urgency=low
* Initial Release.

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nova-api-os-volume_19.0.0-0ubuntu2_all.deb OpenStack Compute - OpenStack Volume API frontend
nova-cells_19.0.0-0ubuntu2_all.deb Openstack Compute - cells
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