mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb


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Description

mrtrix3 - diffusion-weighted MRI white matter tractography

Property Value
Distribution Ubuntu 19.04 (Disco Dingo)
Repository Ubuntu Universe amd64
Package filename mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb
Package name mrtrix3
Package version 3.0~rc3+git135
Package release g2b8e7d0c2-3
Package architecture amd64
Package type deb
Category universe/science
Homepage http://www.mrtrix.org
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 7.53 MB
Installed size 46.73 MB
Set of tools to perform diffusion-weighted MRI white matter tractography of the
brain in the presence of crossing fibres, using Constrained Spherical
Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance
images in DICOM, ANALYZE, or uncompressed NIfTI format are supported.

Alternatives

Package Version Architecture Repository
mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_i386.deb 3.0~rc3+git135 i386 Ubuntu Universe
mrtrix3 - - -

Requires

Name Value
libc6 >= 2.27
libfftw3-double3 >= 3.3.5
libgcc1 >= 1:4.0
libgl1 -
libgomp1 >= 4.9
libqt4-opengl >= 4:4.7.0~beta1
libqtcore4 >= 4:4.7.0~beta1
libqtgui4 >= 4:4.8.0
libstdc++6 >= 7
python -
zlib1g >= 1:1.1.4

Conflicts

Name Value
mrtrix -

Download

Type URL
Mirror archive.ubuntu.com
Binary Package mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb
Source Package mrtrix3

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install mrtrix3 deb package:
    # sudo apt-get install mrtrix3

Files

Path
/usr/bin/mrview
/usr/lib/mrtrix3/bin/5tt2gmwmi
/usr/lib/mrtrix3/bin/5tt2vis
/usr/lib/mrtrix3/bin/5ttcheck
/usr/lib/mrtrix3/bin/5ttedit
/usr/lib/mrtrix3/bin/5ttgen
/usr/lib/mrtrix3/bin/afdconnectivity
/usr/lib/mrtrix3/bin/amp2response
/usr/lib/mrtrix3/bin/amp2sh
/usr/lib/mrtrix3/bin/average_response
/usr/lib/mrtrix3/bin/blend
/usr/lib/mrtrix3/bin/connectome2tck
/usr/lib/mrtrix3/bin/connectomestats
/usr/lib/mrtrix3/bin/convert_bruker
/usr/lib/mrtrix3/bin/dcmedit
/usr/lib/mrtrix3/bin/dcminfo
/usr/lib/mrtrix3/bin/dirflip
/usr/lib/mrtrix3/bin/dirgen
/usr/lib/mrtrix3/bin/dirmerge
/usr/lib/mrtrix3/bin/dirorder
/usr/lib/mrtrix3/bin/dirsplit
/usr/lib/mrtrix3/bin/dirstat
/usr/lib/mrtrix3/bin/dwi2adc
/usr/lib/mrtrix3/bin/dwi2fod
/usr/lib/mrtrix3/bin/dwi2mask
/usr/lib/mrtrix3/bin/dwi2response
/usr/lib/mrtrix3/bin/dwi2tensor
/usr/lib/mrtrix3/bin/dwibiascorrect
/usr/lib/mrtrix3/bin/dwidenoise
/usr/lib/mrtrix3/bin/dwiextract
/usr/lib/mrtrix3/bin/dwigradcheck
/usr/lib/mrtrix3/bin/dwiintensitynorm
/usr/lib/mrtrix3/bin/dwinormalise
/usr/lib/mrtrix3/bin/dwipreproc
/usr/lib/mrtrix3/bin/dwishellmath
/usr/lib/mrtrix3/bin/fixel2sh
/usr/lib/mrtrix3/bin/fixel2tsf
/usr/lib/mrtrix3/bin/fixel2voxel
/usr/lib/mrtrix3/bin/fixelcfestats
/usr/lib/mrtrix3/bin/fixelconvert
/usr/lib/mrtrix3/bin/fixelcorrespondence
/usr/lib/mrtrix3/bin/fixelcrop
/usr/lib/mrtrix3/bin/fixelreorient
/usr/lib/mrtrix3/bin/fod2dec
/usr/lib/mrtrix3/bin/fod2fixel
/usr/lib/mrtrix3/bin/foreach
/usr/lib/mrtrix3/bin/gen_scheme
/usr/lib/mrtrix3/bin/label2colour
/usr/lib/mrtrix3/bin/label2mesh
/usr/lib/mrtrix3/bin/labelconvert
/usr/lib/mrtrix3/bin/labelsgmfix
/usr/lib/mrtrix3/bin/maskdump
/usr/lib/mrtrix3/bin/maskfilter
/usr/lib/mrtrix3/bin/mesh2voxel
/usr/lib/mrtrix3/bin/meshconvert
/usr/lib/mrtrix3/bin/meshfilter
/usr/lib/mrtrix3/bin/mraverageheader
/usr/lib/mrtrix3/bin/mrcalc
/usr/lib/mrtrix3/bin/mrcat
/usr/lib/mrtrix3/bin/mrcheckerboardmask
/usr/lib/mrtrix3/bin/mrclusterstats
/usr/lib/mrtrix3/bin/mrconvert
/usr/lib/mrtrix3/bin/mrcrop
/usr/lib/mrtrix3/bin/mrdegibbs
/usr/lib/mrtrix3/bin/mrdump
/usr/lib/mrtrix3/bin/mredit
/usr/lib/mrtrix3/bin/mrfilter
/usr/lib/mrtrix3/bin/mrhistmatch
/usr/lib/mrtrix3/bin/mrhistogram
/usr/lib/mrtrix3/bin/mrinfo
/usr/lib/mrtrix3/bin/mrmath
/usr/lib/mrtrix3/bin/mrmetric
/usr/lib/mrtrix3/bin/mrpad
/usr/lib/mrtrix3/bin/mrregister
/usr/lib/mrtrix3/bin/mrresize
/usr/lib/mrtrix3/bin/mrstats
/usr/lib/mrtrix3/bin/mrthreshold
/usr/lib/mrtrix3/bin/mrtransform
/usr/lib/mrtrix3/bin/mrview
/usr/lib/mrtrix3/bin/mtnormalise
/usr/lib/mrtrix3/bin/notfound
/usr/lib/mrtrix3/bin/peaks2amp
/usr/lib/mrtrix3/bin/population_template
/usr/lib/mrtrix3/bin/sh2amp
/usr/lib/mrtrix3/bin/sh2peaks
/usr/lib/mrtrix3/bin/sh2power
/usr/lib/mrtrix3/bin/sh2response
/usr/lib/mrtrix3/bin/shbasis
/usr/lib/mrtrix3/bin/shconv
/usr/lib/mrtrix3/bin/shview
/usr/lib/mrtrix3/bin/tck2connectome
/usr/lib/mrtrix3/bin/tck2fixel
/usr/lib/mrtrix3/bin/tckconvert
/usr/lib/mrtrix3/bin/tckdfc
/usr/lib/mrtrix3/bin/tckedit
/usr/lib/mrtrix3/bin/tckgen
/usr/lib/mrtrix3/bin/tckglobal
/usr/lib/mrtrix3/bin/tckinfo
/usr/lib/mrtrix3/bin/tckmap
/usr/lib/mrtrix3/bin/tckresample
/usr/lib/mrtrix3/bin/tcksample
/usr/lib/mrtrix3/bin/tcksift
/usr/lib/mrtrix3/bin/tcksift2
/usr/lib/mrtrix3/bin/tckstats
/usr/lib/mrtrix3/bin/tcktransform
/usr/lib/mrtrix3/bin/tensor2metric
/usr/lib/mrtrix3/bin/transformcalc
/usr/lib/mrtrix3/bin/transformcompose
/usr/lib/mrtrix3/bin/transformconvert
/usr/lib/mrtrix3/bin/tsfdivide
/usr/lib/mrtrix3/bin/tsfinfo
/usr/lib/mrtrix3/bin/tsfmult
/usr/lib/mrtrix3/bin/tsfsmooth
/usr/lib/mrtrix3/bin/tsfthreshold
/usr/lib/mrtrix3/bin/tsfvalidate
/usr/lib/mrtrix3/bin/vectorstats
/usr/lib/mrtrix3/bin/voxel2fixel
/usr/lib/mrtrix3/bin/voxel2mesh
/usr/lib/mrtrix3/bin/warp2metric
/usr/lib/mrtrix3/bin/warpconvert
/usr/lib/mrtrix3/bin/warpcorrect
/usr/lib/mrtrix3/bin/warpinit
/usr/lib/mrtrix3/bin/warpinvert
/usr/lib/mrtrix3/icons/adjustbutton.svg
/usr/lib/mrtrix3/icons/brush.svg
/usr/lib/mrtrix3/icons/clear.svg
/usr/lib/mrtrix3/icons/close.svg
/usr/lib/mrtrix3/icons/colourmap.svg
/usr/lib/mrtrix3/icons/copy_from_above.svg
/usr/lib/mrtrix3/icons/copy_from_below.svg
/usr/lib/mrtrix3/icons/cursor_brightness_contrast.svg
/usr/lib/mrtrix3/icons/cursor_crosshairs.svg
/usr/lib/mrtrix3/icons/cursor_draw.svg
/usr/lib/mrtrix3/icons/cursor_erase.svg
/usr/lib/mrtrix3/icons/cursor_pan.svg
/usr/lib/mrtrix3/icons/cursor_pan_through_plane.svg
/usr/lib/mrtrix3/icons/cursor_rotate_inplane.svg
/usr/lib/mrtrix3/icons/cursor_rotate_throughplane.svg
/usr/lib/mrtrix3/icons/cursor_zoom.svg
/usr/lib/mrtrix3/icons/draw.svg
/usr/lib/mrtrix3/icons/erase.svg
/usr/lib/mrtrix3/icons/file.svg
/usr/lib/mrtrix3/icons/fill.svg
/usr/lib/mrtrix3/icons/hide.svg
/usr/lib/mrtrix3/icons/image.svg
/usr/lib/mrtrix3/icons/info.svg
/usr/lib/mrtrix3/icons/inspect.svg
/usr/lib/mrtrix3/icons/invert.svg
/usr/lib/mrtrix3/icons/light.svg
/usr/lib/mrtrix3/icons/lock.svg
/usr/lib/mrtrix3/icons/move.svg
/usr/lib/mrtrix3/icons/mrtrix.png
/usr/lib/mrtrix3/icons/mrview.qrc
/usr/lib/mrtrix3/icons/new.svg
/usr/lib/mrtrix3/icons/odf_dixel.svg
/usr/lib/mrtrix3/icons/odf_sh.svg
/usr/lib/mrtrix3/icons/odf_tensor.svg
/usr/lib/mrtrix3/icons/open.svg
/usr/lib/mrtrix3/icons/record.svg
/usr/lib/mrtrix3/icons/rectangle.svg
/usr/lib/mrtrix3/icons/redo.svg
/usr/lib/mrtrix3/icons/reset.svg
/usr/lib/mrtrix3/icons/restore.svg
/usr/lib/mrtrix3/icons/rotate.svg
/usr/lib/mrtrix3/icons/save.svg
/usr/lib/mrtrix3/icons/select_contrast.svg
/usr/lib/mrtrix3/icons/settings.svg
/usr/lib/mrtrix3/icons/shview.qrc
/usr/lib/mrtrix3/icons/start.svg
/usr/lib/mrtrix3/icons/stop.svg
/usr/lib/mrtrix3/icons/tools.svg
/usr/lib/mrtrix3/icons/undo.svg
/usr/lib/mrtrix3/icons/view.svg
/usr/lib/mrtrix3/icons/warn.svg
/usr/lib/mrtrix3/icons/desktop/128x128/mrtrix.png
/usr/lib/mrtrix3/icons/desktop/16x16/mrtrix.png
/usr/lib/mrtrix3/icons/desktop/32x32/mrtrix.png
/usr/lib/mrtrix3/icons/desktop/48x48/mrtrix.png
/usr/lib/mrtrix3/icons/desktop/64x64/mrtrix.png
/usr/lib/mrtrix3/lib/libmrtrix.so
/usr/lib/mrtrix3/lib/mrtrix3/__init__.py
/usr/lib/mrtrix3/lib/mrtrix3/_version.py
/usr/lib/mrtrix3/lib/mrtrix3/algorithm.py
/usr/lib/mrtrix3/lib/mrtrix3/app.py
/usr/lib/mrtrix3/lib/mrtrix3/file.py
/usr/lib/mrtrix3/lib/mrtrix3/fsl.py
/usr/lib/mrtrix3/lib/mrtrix3/image.py
/usr/lib/mrtrix3/lib/mrtrix3/path.py
/usr/lib/mrtrix3/lib/mrtrix3/phaseEncoding.py
/usr/lib/mrtrix3/lib/mrtrix3/run.py
/usr/lib/mrtrix3/lib/mrtrix3/_5ttgen/__init__.py
/usr/lib/mrtrix3/lib/mrtrix3/_5ttgen/freesurfer.py
/usr/lib/mrtrix3/lib/mrtrix3/_5ttgen/fsl.py
/usr/lib/mrtrix3/lib/mrtrix3/_5ttgen/gif.py
/usr/lib/mrtrix3/lib/mrtrix3/dwi2response/__init__.py
/usr/lib/mrtrix3/lib/mrtrix3/dwi2response/dhollander.py
/usr/lib/mrtrix3/lib/mrtrix3/dwi2response/fa.py
/usr/lib/mrtrix3/lib/mrtrix3/dwi2response/manual.py
/usr/lib/mrtrix3/lib/mrtrix3/dwi2response/msmt_5tt.py
/usr/lib/mrtrix3/lib/mrtrix3/dwi2response/tax.py
/usr/lib/mrtrix3/lib/mrtrix3/dwi2response/tournier.py
/usr/share/applications/mrtrix3.desktop
/usr/share/doc/mrtrix3/README.Debian
/usr/share/doc/mrtrix3/changelog.Debian.gz
/usr/share/doc/mrtrix3/copyright
/usr/share/man/man1/mrtrix3.1.gz
/usr/share/man/man1/mrview.1.gz
/usr/share/matlab/site/m/mrtrix
/usr/share/mrtrix3/matlab/read_mrtrix.m
/usr/share/mrtrix3/matlab/read_mrtrix_tracks.m
/usr/share/mrtrix3/matlab/write_mrtrix.m
/usr/share/mrtrix3/matlab/write_mrtrix_tracks.m
/usr/share/octave/site/m/mrtrix
/usr/share/pixmaps/mrtrix.png

Changelog

2019-01-22 - Yaroslav Halchenko <debian@onerussian.com>
mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-3) unstable; urgency=medium
* Clean up *.py? files upon install
* debian/control, debian/patches/up_blend_python - just ask/use default
Python (currently python2)
2019-01-21 - Yaroslav Halchenko <debian@onerussian.com>
mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-2) neurodebian; urgency=medium
* Picked up two commits from upstream's origin/simplify_gl_core_header
to resolve i386 build failure
* Fix symlinks for the manpages to point to mrtrix3.1.gz
not the absent mrtrix.1.gz (Closes: #916775)
* Ship Python mrtrix3 module for internal use:
- Many tools rely on Python (2) support module, which was omitted
2018-12-13 - Yaroslav Halchenko <debian@onerussian.com>
mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-1) UNRELEASED; urgency=medium
* Fresh upstream snapshot
- potentially fixes FTBFS on some non-x32 platforms where failure was
due to the absent SSE support and xmmintrin.h
* debian/gbp.conf
- adjusted to relfect used branches layout, where debian branch is based on
(original) upstream's master branch.
2018-11-21 - Yaroslav Halchenko <debian@onerussian.com>
mrtrix3 (3.0~rc3+git86-g4b523b413-2) neurodebian; urgency=medium
* Need to disable PIE on older systems
2018-09-05 - Yaroslav Halchenko <debian@onerussian.com>
mrtrix3 (3.0~rc3+git86-g4b523b413-1) unstable; urgency=medium
* Initial packaging based on mrtrix package (Closes: #907978)
* Initial packaging for mrtrix3 as a separate source package to
allow retaining (although with installation conflict) of both
2 and 3 series

See Also

Package Description
mrtrix_0.2.13-2_amd64.deb diffusion-weighted MRI white matter tractography
mruby_2.0.0-1_amd64.deb lightweight implementation of the Ruby language
mscgen_0.20-12_amd64.deb Message Sequence Chart (MSC) generator
mseed2sac_2.2+ds1-4_amd64.deb Convert MiniSEED time series data to SAC
msgp_1.0.2-2_amd64.deb Go code generator for MessagePack
msi-keyboard_1.1-2_amd64.deb command line tool to change MSI steelseries keyboards color setup
msitools_0.98-1_amd64.deb Windows Installer file manipulation tool
msktutil_1.0-1_amd64.deb Utility for interoperability with Active Directory
msmtp-gnome_1.8.3-1_amd64.deb light SMTP client with support for server profiles - with GNOME keyring support
msmtp-mta_1.8.3-1_amd64.deb light SMTP client with support for server profiles - the regular MTA
msmtp_1.8.3-1_amd64.deb light SMTP client with support for server profiles
msort-gui_8.53-2.2build1_all.deb tcl/tk gui for msort utility
msort_8.53-2.2build1_amd64.deb utility for sorting records in complex ways
msp430-libc_20120224-1ubuntu1_amd64.deb Standard C library for TI MSP430 development
msp430mcu_20120406-2_all.deb Spec files, headers and linker scripts for TI's MSP430 targets
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