minimap_0.2-4_amd64.deb


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Description

minimap - tool for approximate mapping of long biosequences such as DNA reads

Property Value
Distribution Ubuntu 19.04 (Disco Dingo)
Repository Ubuntu Universe amd64
Package filename minimap_0.2-4_amd64.deb
Package name minimap
Package version 0.2
Package release 4
Package architecture amd64
Package type deb
Category universe/science
Homepage https://github.com/lh3/minimap
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 26.68 KB
Installed size 71.00 KB
Minimap is an experimental tool to efficiently find multiple approximate
mapping positions between two sets of long biological sequences, such as
between DNA reads and reference genomes, between genomes and between long
noisy reads.
Minimap does not generate alignments as of now and because of this, it is
usually tens of times faster than mainstream aligners.
It does not replace mainstream aligners, but it can be useful when you
want to quickly identify long approximate matches at moderate divergence among
a huge collection of sequences. For this task, it is much faster than most
existing tools.

Alternatives

Package Version Architecture Repository
minimap_0.2-4_i386.deb 0.2 i386 Ubuntu Universe
minimap - - -

Requires

Name Value
libc6 >= 2.14
zlib1g >= 1:1.1.4

Download

Type URL
Mirror archive.ubuntu.com
Binary Package minimap_0.2-4_amd64.deb
Source Package minimap

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install minimap deb package:
    # sudo apt-get install minimap

Files

Path
/usr/bin/minimap
/usr/share/doc/minimap/changelog.Debian.gz
/usr/share/doc/minimap/copyright
/usr/share/man/man1/minimap.1.gz

Changelog

2018-07-29 - Andreas Tille <tille@debian.org>
minimap (0.2-4) unstable; urgency=medium
* Team upload.
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
* Drop unneeded Testsuite: autopkgtest
2016-07-31 - Sascha Steinbiss <satta@debian.org>
minimap (0.2-3) unstable; urgency=medium
* Add missing header files.
* Adjust autopkgtest to build example outside of upstream source.
* Update uploader email.
* Bump Standards-Version with no changes.
* Use secure Vcs-Git.
* Enable +bindnow.
2016-01-13 - Sascha Steinbiss <sascha@steinbiss.name>
minimap (0.2-2) unstable; urgency=medium
* Fix building on 32-bit archs.
2016-01-10 - Sascha Steinbiss <sascha@steinbiss.name>
minimap (0.2-1) unstable; urgency=low
* Initial packaging (Closes: #810600)

See Also

Package Description
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mininet_2.2.2-4_amd64.deb process-based network emulator
minisapserver_0.3.6-1.1build1_amd64.deb Mini SAP Server
minisat+_1.0-4_amd64.deb solver for pseudo-Boolean constraints
minisat2_2.2.1-5build1_amd64.deb Transitional package for minisat
minisat_2.2.1-5build1_amd64.deb Fast and lightweight SAT solver
minissdpd_1.5.20190210-1_amd64.deb keep memory of all UPnP devices that announced themselves
ministat_20150715-1build1_amd64.deb simple tool for statistical comparison of data sets
minitube_2.9-1_amd64.deb Native YouTube client
miniupnpc_2.1-1build1_amd64.deb UPnP IGD client lightweight library client
miniupnpd_2.1-5_amd64.deb UPnP and NAT-PMP daemon for gateway routers
minizinc-ide_2.1.7-1_amd64.deb MiniZinc constraint modelling language IDE
minizinc_2.1.7+dfsg1-1_amd64.deb constraint modelling language and tool chain
minizip_1.1-8build1_amd64.deb compression library - minizip tools
minlog_4.0.99.20100221-6_all.deb Proof assistant based on first order natural deduction calculus
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