minia_1.6906-2_amd64.deb


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Description

minia - short-read biological sequence assembler

Property Value
Distribution Ubuntu 19.04 (Disco Dingo)
Repository Ubuntu Universe amd64
Package filename minia_1.6906-2_amd64.deb
Package name minia
Package version 1.6906
Package release 2
Package architecture amd64
Package type deb
Category universe/science
Homepage http://minia.genouest.org/
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 176.90 KB
Installed size 287.00 KB
Short-read DNA sequence assembler based on a de Bruijn graph,
capable of assembling a human genome on a desktop computer in a day.
The output of Minia is a set of contigs.
Minia produces results of similar contiguity and accuracy to other
de Bruijn assemblers (e.g. Velvet).

Alternatives

Package Version Architecture Repository
minia_1.6906-2_i386.deb 1.6906 i386 Ubuntu Universe
minia - - -

Requires

Name Value
bc -
libc6 >= 2.14
libgcc1 >= 1:3.0
libstdc++6 >= 5.2
zlib1g >= 1:1.2.3.4

Download

Type URL
Mirror archive.ubuntu.com
Binary Package minia_1.6906-2_amd64.deb
Source Package minia

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install minia deb package:
    # sudo apt-get install minia

Files

Path
/usr/bin/minia
/usr/share/doc/minia/README.Debian
/usr/share/doc/minia/README.test
/usr/share/doc/minia/changelog.Debian.gz
/usr/share/doc/minia/copyright
/usr/share/doc/minia/read50x_ref10K_e001.fasta.gz
/usr/share/doc/minia/run-unit-test

Changelog

2017-12-01 - Nadiya Sitdykova <rovenskasa@gmail.com>
minia (1.6906-2) unstable; urgency=medium
* Team upload.
[Nadiya Sitdykova]
* add autopkgtest test-suite 
[ Andreas Tille ]
* debhelper 10
* cme fix dpkg-control
* hardening
* Standards-Version: 4.1.1
* Point watch file to new location to spot new upstream version
2014-11-21 - Olivier Sallou <osallou@debian.org>
minia (1.6906-1) unstable; urgency=medium
* New upstream release 
$ d/patches: updates patches to new release
2014-02-21 - Olivier Sallou <osallou@debian.org>
minia (1.6088-1) unstable; urgency=low
* New upstream release 
Upstream doc added to source package
2014-01-13 - Olivier Sallou <osallou@debian.org>
minia (1.6067+dfsg-2) unstable; urgency=low
[ Olivier Sallou ]
* d/control: Add info on assembler term (Closes: #735158).
Add missing deps (Closes: #735331).
[ Andreas Tille ]
* d/upstream: Fixed reference
2013-12-21 - Olivier Sallou <osallou@debian.org>
minia (1.6067+dfsg-1) unstable; urgency=medium
* First debian package (Closes: #735158).

See Also

Package Description
miniasm_0.3+dfsg-1_amd64.deb ultrafast de novo assembler for long noisy DNA sequencing reads
minica_1.0-1build1_amd64.deb super micro binary to issue new CAs
minicom_2.7.1-1build1_amd64.deb Friendly menu driven serial communication program
minicoredumper-utils_2.0.1-1_amd64.deb minicoredumper utilities
minicoredumper_2.0.1-1_amd64.deb generate minimal and customized core dump files on Linux
minidisc-utils_0.9.16-2_amd64.deb Command line utilities for MiniDisc access
minidjvu_0.8.svn.2010.05.06+dfsg-6_amd64.deb Monochrome DjVu multipage encoder, single page encoder/decoder
minidlna_1.2.1+dfsg-1build1_amd64.deb lightweight DLNA/UPnP-AV server targeted at embedded systems
minify_2.3.8-1_amd64.deb CLI implementation of the Go minify library package
minilzip_1.11-3_amd64.deb minified, lossless data compressor based on the LZMA algorithm
minimac4_1.0.0-2_amd64.deb Fast Imputation Based on State Space Reduction HMM
minimap2_2.15+dfsg-1_amd64.deb versatile pairwise aligner for genomic and spliced nucleotide sequences
minimap_0.2-4_amd64.deb tool for approximate mapping of long biosequences such as DNA reads
minimodem_0.24-1_amd64.deb general-purpose software audio FSK modem
mininet_2.2.2-4_amd64.deb process-based network emulator
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