profphd-utils_1.0.10-4_i386.deb


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Description

profphd-utils - profphd helper utilities convert_seq and filter_hssp

Property Value
Distribution Ubuntu 18.04 LTS (Bionic Beaver)
Repository Ubuntu Universe i386
Package filename profphd-utils_1.0.10-4_i386.deb
Package name profphd-utils
Package version 1.0.10
Package release 4
Package architecture i386
Package type deb
Category universe/science
Homepage http://www.rostlab.org/
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 257.64 KB
Installed size 1.24 MB
The package provides the following binary utilities: convert_seq, filter_hssp.
These are used by prof from the profphd package: a secondary structure,
accessibility and transmembrane helix predictor from Burkhard Rost.

Alternatives

Package Version Architecture Repository
profphd-utils_1.0.10-4_amd64.deb 1.0.10 amd64 Ubuntu Universe
profphd-utils - - -

Requires

Name Value
libc6 >= 2.4
libgfortran4 >= 7

Download

Type URL
Mirror archive.ubuntu.com
Binary Package profphd-utils_1.0.10-4_i386.deb
Source Package profphd-utils

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install profphd-utils deb package:
    # sudo apt-get install profphd-utils

Files

Path
/usr/bin/convert_seq
/usr/bin/filter_hssp
/usr/share/doc/profphd-utils/README.Debian
/usr/share/doc/profphd-utils/README.test
/usr/share/doc/profphd-utils/changelog.Debian.gz
/usr/share/doc/profphd-utils/convert-seq-test
/usr/share/doc/profphd-utils/copyright
/usr/share/doc/profphd-utils/filter-hssp-test
/usr/share/doc/profphd-utils/examples/1ppt.hssp.gz
/usr/share/doc/profphd-utils/examples/Maxhom_GCG.metric.gz
/usr/share/man/man1/convert_seq.1.gz
/usr/share/man/man1/filter_hssp.1.gz

Changelog

2017-11-16 - Andreas Tille <tille@debian.org>
profphd-utils (1.0.10-4) unstable; urgency=medium
* Moved packaging from SVN to Git
* debhelper 10
* Standards-Version: 4.1.1
2016-07-08 - Tatiana Malygina <merlettaia@gmail.com>
profphd-utils (1.0.10-3) unstable; urgency=medium
* Team upload.
* add debian/examples/ to use with testsuite
* add profphd-utils.examples
* add testsuite for autopkgtest
* add files in debian/examples/ to debian/copyright, 
* run cme fix dpkg-copyright
* add debian/docs
* add debian/README.test
* cme fix dpkg-control
* add hardening
2016-01-08 - Andreas Tille <tille@debian.org>
profphd-utils (1.0.10-2) unstable; urgency=medium
* Add myself to Uploaders
* cme fix dpkg-control
* Priority: optional
* debhelper 9
* d/copyright converted to DEP5
2012-08-14 - Laszlo Kajan <lkajan@rostlab.org>
profphd-utils (1.0.10-1) unstable; urgency=low
* New upstream release.
2012-06-01 - Laszlo Kajan <lkajan@rostlab.org>
profphd-utils (1.0.9-1) unstable; urgency=low
* New upstream release.
* Changed from cdbs to dh.
2011-09-27 - Laszlo Kajan <lkajan@rostlab.org>
profphd-utils (1.0.8-1) unstable; urgency=low
* Initial release in Debian (Closes: #643323)
2011-02-28 - Laszlo Kajan <lkajan@rostlab.org>
profphd-utils (1.0.6) unstable; urgency=low
* Debian native now
2010-04-01 - Laszlo Kajan <lkajan@rostlab.org>
profphd-utils (1.0.5)
* Introduced AM_FFLAGS; FFLAGS now can be used on the command line/ENV as expected
2010-01-12 - Laszlo Kajan <lkajan@rostlab.org>
profphd-utils (1.0.4)
* increased MAXCORE to 16777216 in filter_hssp.f in order to allow a big alignment to fit (DMD_HUMAN.hssp example)
* Made sequence names case sensitive for READ_MSF routine - solves bug with 3h4p_A and 3h4p_a chains mistaken for the same thing
2010-01-05 - Laszlo Kajan <lkajan@rostlab.org>
profphd-utils (1.0.3)
* Removed unnecessary directories; made not to install *.{LINUX,ALPHA,etc} files
* lib-sys-linux.f was duplicate of lib-sys-LINUX.f - lib-sys-linux.f removed
* Distribute only .LINUX version of lib-sys-*.f

See Also

Package Description
profphd_1.0.42-2_all.deb secondary structure and solvent accessibility predictor
proftmb_1.1.12-7_i386.deb per-residue prediction of bacterial transmembrane beta barrels
proftpd-basic_1.3.5e-1build1_i386.deb Versatile, virtual-hosting FTP daemon - binaries
proftpd-dev_1.3.5e-1build1_i386.deb Versatile, virtual-hosting FTP daemon - development files
proftpd-doc_1.3.5e-1build1_all.deb Versatile, virtual-hosting FTP daemon - documentation
proftpd-mod-autohost_0.4-1build8_i386.deb ProFTPD module mod_autohost
proftpd-mod-case_0.7-1build7_i386.deb ProFTPD module mod_case
proftpd-mod-clamav_0.14~rc2-1build2_i386.deb ProFTPD module mod_clamav
proftpd-mod-dnsbl_0.1.5-4build3_i386.deb ProFTPD module mod_dnsbl
proftpd-mod-fsync_0.2-1build8_i386.deb ProFTPD module mod_fsync
proftpd-mod-geoip_1.3.5e-1build1_i386.deb Versatile, virtual-hosting FTP daemon - GeoIP module
proftpd-mod-ldap_1.3.5e-1build1_i386.deb Versatile, virtual-hosting FTP daemon - LDAP module
proftpd-mod-msg_0.4.1-1.1build7_i386.deb ProFTPD module mod_msg
proftpd-mod-mysql_1.3.5e-1build1_i386.deb Versatile, virtual-hosting FTP daemon - MySQL module
proftpd-mod-odbc_1.3.5e-1build1_i386.deb Versatile, virtual-hosting FTP daemon - ODBC module
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