predictnls_1.0.20-4_all.deb


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Description

predictnls - prediction and analysis of protein nuclear localization signals

Property Value
Distribution Ubuntu 18.04 LTS (Bionic Beaver)
Repository Ubuntu Universe i386
Package filename predictnls_1.0.20-4_all.deb
Package name predictnls
Package version 1.0.20
Package release 4
Package architecture all
Package type deb
Category universe/science
Homepage http://rostlab.org/services/predictNLS/
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 1.34 MB
Installed size 4.49 MB
predictnls is a method for the prediction and analysis of protein nuclear
localization signals (NLS).  In addition to reporting the positions of
NLSs found, predictnls also gives short statistics.

Alternatives

Package Version Architecture Repository
predictnls_1.0.20-4_all.deb 1.0.20 all Ubuntu Universe
predictnls - - -

Requires

Name Value
libconfig-inifiles-perl -
perl:any -

Download

Type URL
Mirror archive.ubuntu.com
Binary Package predictnls_1.0.20-4_all.deb
Source Package predictnls

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install predictnls deb package:
    # sudo apt-get install predictnls

Files

Path
/usr/bin/predictnls
/usr/share/doc/predictnls/README
/usr/share/doc/predictnls/README.test
/usr/share/doc/predictnls/changelog.Debian.gz
/usr/share/doc/predictnls/copyright
/usr/share/doc/predictnls/installation-test
/usr/share/doc/predictnls/examples/O49931.fa
/usr/share/doc/predictnls/examples/O49931.nls
/usr/share/man/man1/predictnls.1.gz
/usr/share/predictnls/grep_NLS_update.pl
/usr/share/predictnls/predictnlsrc.default
/usr/share/predictnls/data/DnaMotifBigStat
/usr/share/predictnls/data/DnaMotifStat
/usr/share/predictnls/data/DnaNlsList
/usr/share/predictnls/data/ExptNls.rdb
/usr/share/predictnls/data/ExptNlsList
/usr/share/predictnls/data/Full_NLS_list
/usr/share/predictnls/data/Loci.dat
/usr/share/predictnls/data/My_NLS_list
/usr/share/predictnls/data/NLS_List
/usr/share/predictnls/data/NewProtList
/usr/share/predictnls/data/OutOfTree
/usr/share/predictnls/data/Papers_NLS.dat
/usr/share/predictnls/data/allProt.fasta
/usr/share/predictnls/data/nlsTree
/usr/share/predictnls/data/prot_list

Changelog

2017-11-16 - Andreas Tille <tille@debian.org>
predictnls (1.0.20-4) unstable; urgency=medium
* Moved packaging from SVN to Git
* debhelper 10
* Standards-Version: 4.1.1
* Fix permission of script
2016-06-11 - Tatiana Malygina <merlettaia@gmail.com>
predictnls (1.0.20-3) unstable; urgency=medium
[ Tatiana Malygina ]
* Team upload.
* cme fix dpkg-control
* add simple testsuite
* add README.test
[ Andreas Tille ]
* Depends: libconfig-inifiles-perl
2016-01-11 - Andreas Tille <tille@debian.org>
predictnls (1.0.20-2) unstable; urgency=medium
* Add myself to Uploaders
* Moved debian/upstream to debian/upstream/metadata
* cme fix dpkg-control
* Priority: optional
* debhelper 9
* DEP5
2012-07-10 - Julia Ertl <ertlj@in.tum.de>
predictnls (1.0.20-1) unstable; urgency=low
* initial release (Closes: #681271)
2011-06-03 - Laszlo Kajan <lkajan@rostlab.org>
predictnls (1.0.18) unstable; urgency=low
* fixed warnings for test sequences MNKIPIKDLLNPGAA and MNKIPIKDLLNPG
* bug 39 (PredictNLS misses any NLS right at start of the protein) fixed
* fixed bug 37, 38, 40: LICENSE file missing; PredictNLS start positions
off by one (using zero based counting); predictNLS only reports last
match for any one NLS motif
2011-04-17 - Laszlo Kajan <lkajan@rostlab.org>
predictnls (1.0.17) unstable; urgency=low
* better error reporting around line 301
2011-02-18 - Laszlo Kajan <lkajan@rostlab.org>
predictnls (1.0.16) unstable; urgency=low
* bugzilla url
* popularity contest
2010-11-04 - Guy Yachdav <gyachdav@rostlab.org>
predictnls (1.0.15) stable; urgency=low
* Changed references to online help
2010-10-13 - Laszlo Kajan <lkajan@rostlab.org>
predictnls (1.0.14) stable; urgency=low
* fixed perl warning
2010-10-13 - Laszlo Kajan <lkajan@rostlab.org>
predictnls (1.0.13) stable; urgency=low
* fixed deletion of output file bug

See Also

Package Description
predictprotein_1.1.07-3_all.deb suite of protein sequence analysis tools
prelink_0.0.20131005-1_i386.deb ELF prelinking utility to speed up dynamic linking
preload_0.6.4-2build1_i386.deb adaptive readahead daemon
prelude-correlator_4.1.1-2_all.deb Security Information and Events Management System [ Correlator ]
prelude-lml-rules_4.1.0-1_all.deb Security Information and Events Management System [ LML Rules ]
prelude-lml_4.1.0-1_i386.deb Security Information and Events Management System [ Log Agent ]
prelude-manager_4.1.1-2_i386.deb Security Information and Events Management System [ Manager ]
prelude-notify_0.9.1-1.1_all.deb Security Information Management System [ Desktop Notifier ]
prelude-utils_4.1.0-4_i386.deb Security Information and Events Management system [ Utils ]
preludedb-utils_4.1.0-1_i386.deb Security Information and Events Management System [ Library utils ]
premake4_4.3+repack1-2build1_i386.deb cross-platform build script generator
prepair-data_0.7.1-1build4_all.deb polygon repair tool -- example data
prepair_0.7.1-1build4_i386.deb polygon repair tool
preprocess_1.1.0+ds-1build1_all.deb portable multi-language file preprocessor
prerex_6.5.4-1_i386.deb course prerequisite chart editor for LaTeX/TikZ
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