libpicard-java-doc_2.8.1+dfsg-3_all.deb


Advertisement

Description

libpicard-java-doc - Documentation for the java picard library

Property Value
Distribution Ubuntu 18.04 (Bionic Beaver)
Repository Ubuntu Universe i386
Package name libpicard-java-doc
Package version 2.8.1+dfsg
Package release 3
Package architecture all
Package type deb
Installed size 10.73 KB
Download size 401.05 KB
Official Mirror archive.ubuntu.com
SAM (Sequence Alignment/Map) format is a generic format for storing
large nucleotide sequence alignments. The picard java library provides classes
to manipulate SAM and BAM files.
This package contains the javadoc of the picard java library.

Alternatives

Package Version Architecture Repository
libpicard-java-doc_2.8.1+dfsg-3_all.deb 2.8.1+dfsg all Ubuntu Universe
libpicard-java-doc - - -

Download

Type URL
Binary Package libpicard-java-doc_2.8.1+dfsg-3_all.deb
Source Package picard-tools

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libpicard-java-doc deb package:
    # sudo apt-get install libpicard-java-doc

Files

Path
/usr/share/doc-base/libpicard-java-doc
/usr/share/doc/libpicard-java-doc/changelog.Debian.gz
/usr/share/doc/libpicard-java-doc/copyright
/usr/share/doc/libpicard-java/api/allclasses-frame.html
/usr/share/doc/libpicard-java/api/allclasses-noframe.html
/usr/share/doc/libpicard-java/api/constant-values.html
/usr/share/doc/libpicard-java/api/deprecated-list.html
/usr/share/doc/libpicard-java/api/help-doc.html
/usr/share/doc/libpicard-java/api/index-all.html
/usr/share/doc/libpicard-java/api/index.html
/usr/share/doc/libpicard-java/api/overview-frame.html
/usr/share/doc/libpicard-java/api/overview-summary.html
/usr/share/doc/libpicard-java/api/overview-tree.html
/usr/share/doc/libpicard-java/api/package-list
/usr/share/doc/libpicard-java/api/script.js
/usr/share/doc/libpicard-java/api/serialized-form.html
/usr/share/doc/libpicard-java/api/stylesheet.css
/usr/share/doc/libpicard-java/api/picard/PicardException.html
/usr/share/doc/libpicard-java/api/picard/Test.html
/usr/share/doc/libpicard-java/api/picard/package-frame.html
/usr/share/doc/libpicard-java/api/picard/package-summary.html
/usr/share/doc/libpicard-java/api/picard/package-tree.html
/usr/share/doc/libpicard-java/api/picard/analysis/AdapterUtility.html
/usr/share/doc/libpicard-java/api/picard/analysis/AlignmentSummaryMetrics.Category.html
/usr/share/doc/libpicard-java/api/picard/analysis/AlignmentSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/AlignmentSummaryMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/BaseDistributionByCycleMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/ChimeraUtil.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectAlignmentSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectBaseDistributionByCycle.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectGcBiasMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectInsertSizeMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectJumpingLibraryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectMultipleMetrics.Program.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectMultipleMetrics.ProgramInterface.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectMultipleMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectOxoGMetrics.CpcgMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectOxoGMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectQualityYieldMetrics.QualityYieldMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectQualityYieldMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectRawWgsMetrics.RawWgsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectRawWgsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectRnaSeqMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectRrbsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetrics.WgsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetrics.WgsMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsFromQuerySorted.FILTERING_STRINGENCY.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsFromQuerySorted.QuerySortedSeqMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsFromQuerySorted.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsFromSampledSites.SampledWgsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsFromSampledSites.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.WgsMetricsWithNonZeroCoverage.Category.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.WgsMetricsWithNonZeroCoverage.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.WgsMetricsWithNonZeroCoverageCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.html
/usr/share/doc/libpicard-java/api/picard/analysis/CompareMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/FingerprintingDetailMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/FingerprintingSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/GcBiasDetailMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/GcBiasMetricsCollector.PerUnitGcBiasMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/GcBiasMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/GcBiasSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/GcBiasUtils.html
/usr/share/doc/libpicard-java/api/picard/analysis/InsertSizeMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/JumpingLibraryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/MeanQualityByCycle.html
/usr/share/doc/libpicard-java/api/picard/analysis/MergeableMetricBase.MergeByAdding.html
/usr/share/doc/libpicard-java/api/picard/analysis/MergeableMetricBase.MergeByAssertEquals.html
/usr/share/doc/libpicard-java/api/picard/analysis/MergeableMetricBase.MergingIsManual.html
/usr/share/doc/libpicard-java/api/picard/analysis/MergeableMetricBase.NoMergingIsDerived.html
/usr/share/doc/libpicard-java/api/picard/analysis/MergeableMetricBase.NoMergingKeepsValue.html
/usr/share/doc/libpicard-java/api/picard/analysis/MergeableMetricBase.html
/usr/share/doc/libpicard-java/api/picard/analysis/MetricAccumulationLevel.html
/usr/share/doc/libpicard-java/api/picard/analysis/QualityScoreDistribution.html
/usr/share/doc/libpicard-java/api/picard/analysis/RnaSeqMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/RrbsCpgDetailMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/RrbsMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/RrbsSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/SinglePassSamProgram.html
/usr/share/doc/libpicard-java/api/picard/analysis/TheoreticalSensitivity.RouletteWheel.html
/usr/share/doc/libpicard-java/api/picard/analysis/TheoreticalSensitivity.html
/usr/share/doc/libpicard-java/api/picard/analysis/package-frame.html
/usr/share/doc/libpicard-java/api/picard/analysis/package-summary.html
/usr/share/doc/libpicard-java/api/picard/analysis/package-tree.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/CollectSequencingArtifactMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/ConvertSequencingArtifactToOxoG.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/ErrorSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/SequencingArtifactMetrics.BaitBiasDetailMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/SequencingArtifactMetrics.BaitBiasSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/SequencingArtifactMetrics.PreAdapterDetailMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/SequencingArtifactMetrics.PreAdapterSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/SequencingArtifactMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/package-frame.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/package-summary.html
/usr/share/doc/libpicard-java/api/picard/analysis/artifacts/package-tree.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/CalculateHsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/CollectHsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/CollectTargetedMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/CollectTargetedPcrMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/HsMetricCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/HsMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/InsertSizeMetricsCollector.PerUnitInsertSizeMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/InsertSizeMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/RnaSeqMetricsCollector.PerUnitRnaSeqMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/RnaSeqMetricsCollector.StrandSpecificity.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/RnaSeqMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/TargetMetricsCollector.Coverage.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/TargetMetricsCollector.PerUnitTargetMetricCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/TargetMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/TargetedPcrMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/TargetedPcrMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/package-frame.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/package-summary.html
/usr/share/doc/libpicard-java/api/picard/analysis/directed/package-tree.html
/usr/share/doc/libpicard-java/api/picard/analysis/replicates/CollectIndependentReplicateMetrics.html
/usr/share/doc/libpicard-java/api/picard/analysis/replicates/IndependentReplicateMetric.html
/usr/share/doc/libpicard-java/api/picard/analysis/replicates/package-frame.html
/usr/share/doc/libpicard-java/api/picard/analysis/replicates/package-summary.html
/usr/share/doc/libpicard-java/api/picard/analysis/replicates/package-tree.html
/usr/share/doc/libpicard-java/api/picard/annotation/AnnotationException.html
/usr/share/doc/libpicard-java/api/picard/annotation/Gene.Transcript.Exon.html
/usr/share/doc/libpicard-java/api/picard/annotation/Gene.Transcript.html
/usr/share/doc/libpicard-java/api/picard/annotation/Gene.html
/usr/share/doc/libpicard-java/api/picard/annotation/GeneAnnotationReader.html
/usr/share/doc/libpicard-java/api/picard/annotation/LocusFunction.html
/usr/share/doc/libpicard-java/api/picard/annotation/RefFlatReader.RefFlatColumns.html
/usr/share/doc/libpicard-java/api/picard/annotation/RefFlatReader.html
/usr/share/doc/libpicard-java/api/picard/annotation/package-frame.html
/usr/share/doc/libpicard-java/api/picard/annotation/package-summary.html
/usr/share/doc/libpicard-java/api/picard/annotation/package-tree.html
/usr/share/doc/libpicard-java/api/picard/cmdline/ClassFinder.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineDefaults.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineParseException.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineParser.ClpEnum.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineParser.OptionDefinition.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineParser.OptionDefinitionByPrintOrderComparator.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineParser.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineParserDefinitionException.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineProgram.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineProgramGroup.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CommandLineProgramProperties.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CreateHtmlDocForProgram.html
/usr/share/doc/libpicard-java/api/picard/cmdline/CreateHtmlDocForStandardOptions.html
/usr/share/doc/libpicard-java/api/picard/cmdline/NestedOptions.html
/usr/share/doc/libpicard-java/api/picard/cmdline/Option.html
/usr/share/doc/libpicard-java/api/picard/cmdline/PicardCommandLine.html
/usr/share/doc/libpicard-java/api/picard/cmdline/PositionalArguments.html
/usr/share/doc/libpicard-java/api/picard/cmdline/StandardOptionDefinitions.html
/usr/share/doc/libpicard-java/api/picard/cmdline/package-frame.html
/usr/share/doc/libpicard-java/api/picard/cmdline/package-summary.html
/usr/share/doc/libpicard-java/api/picard/cmdline/package-tree.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/Alpha.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/Fasta.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/Fingerprinting.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/Illumina.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/Intervals.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/Metrics.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/None.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/SamOrBam.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/Testing.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/VcfOrBcf.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/package-frame.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/package-summary.html
/usr/share/doc/libpicard-java/api/picard/cmdline/programgroups/package-tree.html
/usr/share/doc/libpicard-java/api/picard/fastq/BamToBfq.html
/usr/share/doc/libpicard-java/api/picard/fastq/BamToBfqWriter.html
/usr/share/doc/libpicard-java/api/picard/fastq/Casava18ReadNameEncoder.html
/usr/share/doc/libpicard-java/api/picard/fastq/IlluminaReadNameEncoder.html
/usr/share/doc/libpicard-java/api/picard/fastq/ReadNameEncoder.html
/usr/share/doc/libpicard-java/api/picard/fastq/package-frame.html
/usr/share/doc/libpicard-java/api/picard/fastq/package-summary.html
/usr/share/doc/libpicard-java/api/picard/fastq/package-tree.html
/usr/share/doc/libpicard-java/api/picard/filter/CountingDuplicateFilter.html
/usr/share/doc/libpicard-java/api/picard/filter/CountingFilter.html
/usr/share/doc/libpicard-java/api/picard/filter/CountingMapQFilter.html
/usr/share/doc/libpicard-java/api/picard/filter/CountingPairedFilter.html
/usr/share/doc/libpicard-java/api/picard/filter/package-frame.html
/usr/share/doc/libpicard-java/api/picard/filter/package-summary.html
/usr/share/doc/libpicard-java/api/picard/filter/package-tree.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/CheckFingerprint.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/CrosscheckReadGroupFingerprints.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/DiploidGenotype.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/DiploidHaplotype.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/Fingerprint.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/FingerprintChecker.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/FingerprintResults.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/GenotypeReader.VariantIterator.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/GenotypeReader.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeBlock.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeMap.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeProbabilities.Genotype.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeProbabilities.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeProbabilitiesFromContaminatorSequence.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeProbabilitiesFromGenotype.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeProbabilitiesFromGenotypeLikelihoods.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeProbabilitiesFromSequence.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/HaplotypeProbabilityOfNormalGivenTumor.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/MatchResults.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/Snp.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/package-frame.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/package-summary.html
/usr/share/doc/libpicard-java/api/picard/fingerprint/package-tree.html
/usr/share/doc/libpicard-java/api/picard/illumina/CheckIlluminaDirectory.html
/usr/share/doc/libpicard-java/api/picard/illumina/ClusterDataToSamConverter.html
/usr/share/doc/libpicard-java/api/picard/illumina/CollectIlluminaBasecallingMetrics.html
/usr/share/doc/libpicard-java/api/picard/illumina/CollectIlluminaLaneMetrics.IlluminaLaneMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/illumina/CollectIlluminaLaneMetrics.html
/usr/share/doc/libpicard-java/api/picard/illumina/ExtractIlluminaBarcodes.BarcodeMetric.html
/usr/share/doc/libpicard-java/api/picard/illumina/ExtractIlluminaBarcodes.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaBasecallingMetrics.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaBasecallsConverter.ClusterDataConverter.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaBasecallsConverter.ConvertedClusterDataWriter.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaBasecallsConverter.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaBasecallsToFastq.ReadNameFormat.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaBasecallsToFastq.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaBasecallsToSam.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaLaneMetrics.html
/usr/share/doc/libpicard-java/api/picard/illumina/IlluminaPhasingMetrics.html
/usr/share/doc/libpicard-java/api/picard/illumina/LanePhasingMetricsCollector.html
/usr/share/doc/libpicard-java/api/picard/illumina/MarkIlluminaAdapters.html
/usr/share/doc/libpicard-java/api/picard/illumina/package-frame.html
/usr/share/doc/libpicard-java/api/picard/illumina/package-summary.html
/usr/share/doc/libpicard-java/api/picard/illumina/package-tree.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/BclData.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/ClusterData.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/FourChannelIntensityData.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/IlluminaDataProvider.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/IlluminaDataProviderFactory.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/IlluminaDataType.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/IlluminaFileUtil.SupportedIlluminaFormat.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/IlluminaFileUtil.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/IlluminaMetricsCode.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/IntensityChannel.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/MultiTileBclFileUtil.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/MultiTileBclParser.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/MultiTileFileUtil.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/MultiTileFilterParser.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/MultiTileLocsParser.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/MultiTileParser.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/OutputMapping.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/ParameterizedFileUtil.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/PerTileFileUtil.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/PerTileParser.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/PerTilePerCycleFileUtil.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/PosParser.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/Range.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/ReadData.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/ReadDescriptor.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/ReadStructure.Substructure.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/ReadStructure.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/ReadType.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/Tile.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/TileIndex.TileIndexRecord.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/TileIndex.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/TileMetricsUtil.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/TilePhasingValue.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/TileTemplateRead.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/package-frame.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/package-summary.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/package-tree.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/BarcodeFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/BciFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/BclFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/ClocsFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/FileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/FilterFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/LocsFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/MultiTileBclFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/MultiTileLocsFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/PosFileFaker.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/package-frame.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/package-summary.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/fakers/package-tree.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/AbstractIlluminaPositionFileReader.PositionInfo.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/AbstractIlluminaPositionFileReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/BarcodeFileReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/BclIndexReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/BclQualityEvaluationStrategy.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/BclReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/ClocsFileReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/FilterFileReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/LocsFileReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/MMapBackedIteratorFactory.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/PosFileReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/TileMetricsOutReader.IlluminaLaneTileCode.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/TileMetricsOutReader.IlluminaTileMetrics.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/TileMetricsOutReader.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/package-frame.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/package-summary.html
/usr/share/doc/libpicard-java/api/picard/illumina/parser/readers/package-tree.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/CollectHiSeqXPfFailMetrics.PFFailDetailedMetric.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/CollectHiSeqXPfFailMetrics.PFFailSummaryMetric.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/CollectHiSeqXPfFailMetrics.ReadClassifier.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/CollectHiSeqXPfFailMetrics.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/package-frame.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/package-summary.html
/usr/share/doc/libpicard-java/api/picard/illumina/quality/package-tree.html
/usr/share/doc/libpicard-java/api/picard/metrics/GcBiasMetrics.html
/usr/share/doc/libpicard-java/api/picard/metrics/MultiLevelCollector.html
/usr/share/doc/libpicard-java/api/picard/metrics/MultilevelMetrics.html
/usr/share/doc/libpicard-java/api/picard/metrics/PerUnitMetricCollector.html
/usr/share/doc/libpicard-java/api/picard/metrics/SAMRecordAndReference.html
/usr/share/doc/libpicard-java/api/picard/metrics/SAMRecordAndReferenceMultiLevelCollector.html
/usr/share/doc/libpicard-java/api/picard/metrics/SAMRecordMultiLevelCollector.html
/usr/share/doc/libpicard-java/api/picard/metrics/package-frame.html
/usr/share/doc/libpicard-java/api/picard/metrics/package-summary.html
/usr/share/doc/libpicard-java/api/picard/metrics/package-tree.html
/usr/share/doc/libpicard-java/api/picard/pedigree/PedFile.PedTrio.html
/usr/share/doc/libpicard-java/api/picard/pedigree/PedFile.html
/usr/share/doc/libpicard-java/api/picard/pedigree/Sex.html
/usr/share/doc/libpicard-java/api/picard/pedigree/package-frame.html
/usr/share/doc/libpicard-java/api/picard/pedigree/package-summary.html
/usr/share/doc/libpicard-java/api/picard/pedigree/package-tree.html
/usr/share/doc/libpicard-java/api/picard/reference/ExtractSequences.html
/usr/share/doc/libpicard-java/api/picard/reference/NonNFastaSize.html
/usr/share/doc/libpicard-java/api/picard/reference/NormalizeFasta.html
/usr/share/doc/libpicard-java/api/picard/reference/package-frame.html
/usr/share/doc/libpicard-java/api/picard/reference/package-summary.html
/usr/share/doc/libpicard-java/api/picard/reference/package-tree.html
/usr/share/doc/libpicard-java/api/picard/sam/AbstractAlignmentMerger.html
/usr/share/doc/libpicard-java/api/picard/sam/AddCommentsToBam.html
/usr/share/doc/libpicard-java/api/picard/sam/AddOrReplaceReadGroups.html
/usr/share/doc/libpicard-java/api/picard/sam/BamIndexStats.html
/usr/share/doc/libpicard-java/api/picard/sam/BestEndMapqPrimaryAlignmentStrategy.html
/usr/share/doc/libpicard-java/api/picard/sam/BestMapqPrimaryAlignmentSelectionStrategy.html
/usr/share/doc/libpicard-java/api/picard/sam/BuildBamIndex.html
/usr/share/doc/libpicard-java/api/picard/sam/CalculateReadGroupChecksum.html
/usr/share/doc/libpicard-java/api/picard/sam/CheckTerminatorBlock.html
/usr/share/doc/libpicard-java/api/picard/sam/CleanSam.html
/usr/share/doc/libpicard-java/api/picard/sam/CompareSAMs.html
/usr/share/doc/libpicard-java/api/picard/sam/CreateSequenceDictionary.html
/usr/share/doc/libpicard-java/api/picard/sam/DownsampleSam.html
/usr/share/doc/libpicard-java/api/picard/sam/DuplicationMetrics.html
/usr/share/doc/libpicard-java/api/picard/sam/EarliestFragmentPrimaryAlignmentSelectionStrategy.html
/usr/share/doc/libpicard-java/api/picard/sam/FastqToSam.html
/usr/share/doc/libpicard-java/api/picard/sam/FilterSamReads.Filter.html
/usr/share/doc/libpicard-java/api/picard/sam/FilterSamReads.html
/usr/share/doc/libpicard-java/api/picard/sam/FixMateInformation.html
/usr/share/doc/libpicard-java/api/picard/sam/GatherBamFiles.html
/usr/share/doc/libpicard-java/api/picard/sam/MergeBamAlignment.html
/usr/share/doc/libpicard-java/api/picard/sam/MergeSamFiles.html
/usr/share/doc/libpicard-java/api/picard/sam/MostDistantPrimaryAlignmentSelectionStrategy.html
/usr/share/doc/libpicard-java/api/picard/sam/PositionBasedDownsampleSam.html
/usr/share/doc/libpicard-java/api/picard/sam/PrimaryAlignmentSelectionStrategy.html
/usr/share/doc/libpicard-java/api/picard/sam/ReorderSam.html
/usr/share/doc/libpicard-java/api/picard/sam/ReplaceSamHeader.html
/usr/share/doc/libpicard-java/api/picard/sam/RevertOriginalBaseQualitiesAndAddMateCigar.CanSkipSamFile.html
/usr/share/doc/libpicard-java/api/picard/sam/RevertOriginalBaseQualitiesAndAddMateCigar.html
/usr/share/doc/libpicard-java/api/picard/sam/RevertSam.FileType.html
/usr/share/doc/libpicard-java/api/picard/sam/RevertSam.html
/usr/share/doc/libpicard-java/api/picard/sam/SamAlignmentMerger.html
/usr/share/doc/libpicard-java/api/picard/sam/SamFormatConverter.html
/usr/share/doc/libpicard-java/api/picard/sam/SamToFastq.html
/usr/share/doc/libpicard-java/api/picard/sam/SetNmAndUqTags.html
/usr/share/doc/libpicard-java/api/picard/sam/SetNmMdAndUqTags.html
/usr/share/doc/libpicard-java/api/picard/sam/SortSam.html
/usr/share/doc/libpicard-java/api/picard/sam/SplitSamByLibrary.html
/usr/share/doc/libpicard-java/api/picard/sam/ValidateSamFile.Mode.html
/usr/share/doc/libpicard-java/api/picard/sam/ValidateSamFile.html
/usr/share/doc/libpicard-java/api/picard/sam/ViewSam.AlignmentStatus.html
/usr/share/doc/libpicard-java/api/picard/sam/ViewSam.PfStatus.html
/usr/share/doc/libpicard-java/api/picard/sam/ViewSam.html
/usr/share/doc/libpicard-java/api/picard/sam/package-frame.html
/usr/share/doc/libpicard-java/api/picard/sam/package-summary.html
/usr/share/doc/libpicard-java/api/picard/sam/package-tree.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/EstimateLibraryComplexity.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/MarkDuplicates.DuplicateTaggingPolicy.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/MarkDuplicates.DuplicateType.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/MarkDuplicates.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/MarkDuplicatesWithMateCigar.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/MarkDuplicatesWithMateCigarIterator.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/SimpleMarkDuplicatesWithMateCigar.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/UmiAwareMarkDuplicatesWithMateCigar.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/UmiGraph.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/package-frame.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/package-summary.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/package-tree.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/AbstractMarkDuplicatesCommandLineProgram.SamHeaderAndIterator.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/AbstractMarkDuplicatesCommandLineProgram.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/AbstractOpticalDuplicateFinderCommandLineProgram.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/DiskBasedReadEndsForMarkDuplicatesMap.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/LibraryIdGenerator.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/MarkQueue.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/OpticalDuplicateFinder.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/PhysicalLocationForMateCigar.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/PhysicalLocationForMateCigarSet.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/ReadEnds.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/ReadEndsForMarkDuplicates.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesCodec.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesMap.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesWithBarcodes.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesWithBarcodesCodec.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/ReadEndsForMateCigar.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/SamRecordWithOrdinalAndSetDuplicateReadFlag.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/package-frame.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/package-summary.html
/usr/share/doc/libpicard-java/api/picard/sam/markduplicates/util/package-tree.html
/usr/share/doc/libpicard-java/api/picard/sam/util/PhysicalLocation.html
/usr/share/doc/libpicard-java/api/picard/sam/util/PhysicalLocationInt.html
/usr/share/doc/libpicard-java/api/picard/sam/util/PhysicalLocationShort.html
/usr/share/doc/libpicard-java/api/picard/sam/util/ReadNameParser.html
/usr/share/doc/libpicard-java/api/picard/sam/util/package-frame.html
/usr/share/doc/libpicard-java/api/picard/sam/util/package-summary.html
/usr/share/doc/libpicard-java/api/picard/sam/util/package-tree.html
/usr/share/doc/libpicard-java/api/picard/util/AbstractInputParser.html
/usr/share/doc/libpicard-java/api/picard/util/AdapterMarker.html
/usr/share/doc/libpicard-java/api/picard/util/AdapterPair.html
/usr/share/doc/libpicard-java/api/picard/util/AsyncIterator.html
/usr/share/doc/libpicard-java/api/picard/util/AtomicIterator.html
/usr/share/doc/libpicard-java/api/picard/util/BaitDesigner.DesignStrategy.html
/usr/share/doc/libpicard-java/api/picard/util/BaitDesigner.html
/usr/share/doc/libpicard-java/api/picard/util/BasicInputParser.html
/usr/share/doc/libpicard-java/api/picard/util/BedToIntervalList.html
/usr/share/doc/libpicard-java/api/picard/util/CircularByteBuffer.html
/usr/share/doc/libpicard-java/api/picard/util/ClippingUtility.html
/usr/share/doc/libpicard-java/api/picard/util/CsvInputParser.html
/usr/share/doc/libpicard-java/api/picard/util/DbSnpBitSetUtil.DbSnpBitSets.html
/usr/share/doc/libpicard-java/api/picard/util/DbSnpBitSetUtil.html
/usr/share/doc/libpicard-java/api/picard/util/DelimitedTextFileWithHeaderIterator.Row.html
/usr/share/doc/libpicard-java/api/picard/util/DelimitedTextFileWithHeaderIterator.html
/usr/share/doc/libpicard-java/api/picard/util/FifoBuffer.html
/usr/share/doc/libpicard-java/api/picard/util/FileChannelJDKBugWorkAround.html
/usr/share/doc/libpicard-java/api/picard/util/IlluminaUtil.IlluminaAdapterPair.html
/usr/share/doc/libpicard-java/api/picard/util/IlluminaUtil.html
/usr/share/doc/libpicard-java/api/picard/util/IntervalListScatterer.Mode.html
/usr/share/doc/libpicard-java/api/picard/util/IntervalListScatterer.html
/usr/share/doc/libpicard-java/api/picard/util/IntervalListToBed.html
/usr/share/doc/libpicard-java/api/picard/util/IntervalListTools.Action.html
/usr/share/doc/libpicard-java/api/picard/util/IntervalListTools.html
/usr/share/doc/libpicard-java/api/picard/util/Iterators.html
/usr/share/doc/libpicard-java/api/picard/util/LiftOverIntervalList.html
/usr/share/doc/libpicard-java/api/picard/util/MathUtil.LogMath.html
/usr/share/doc/libpicard-java/api/picard/util/MathUtil.html
/usr/share/doc/libpicard-java/api/picard/util/MetricsDoclet.html
/usr/share/doc/libpicard-java/api/picard/util/QuerySortedReadPairIteratorUtil.ReadPair.html
/usr/share/doc/libpicard-java/api/picard/util/QuerySortedReadPairIteratorUtil.html
/usr/share/doc/libpicard-java/api/picard/util/RExecutor.html
/usr/share/doc/libpicard-java/api/picard/util/ScatterIntervalsByNs.html
/usr/share/doc/libpicard-java/api/picard/util/TabbedInputParser.html
/usr/share/doc/libpicard-java/api/picard/util/TabbedTextFileWithHeaderParser.Row.html
/usr/share/doc/libpicard-java/api/picard/util/TabbedTextFileWithHeaderParser.html
/usr/share/doc/libpicard-java/api/picard/util/UnsignedTypeUtil.html
/usr/share/doc/libpicard-java/api/picard/util/VariantType.html
/usr/share/doc/libpicard-java/api/picard/util/package-frame.html
/usr/share/doc/libpicard-java/api/picard/util/package-summary.html
/usr/share/doc/libpicard-java/api/picard/util/package-tree.html
/usr/share/doc/libpicard-java/api/picard/vcf/ByIntervalListVariantContextIterator.html
/usr/share/doc/libpicard-java/api/picard/vcf/CallingMetricAccumulator.Result.html
/usr/share/doc/libpicard-java/api/picard/vcf/CallingMetricAccumulator.html
/usr/share/doc/libpicard-java/api/picard/vcf/CollectVariantCallingMetrics.VariantCallingDetailMetrics.html
/usr/share/doc/libpicard-java/api/picard/vcf/CollectVariantCallingMetrics.VariantCallingSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/vcf/CollectVariantCallingMetrics.html
/usr/share/doc/libpicard-java/api/picard/vcf/FixVcfHeader.html
/usr/share/doc/libpicard-java/api/picard/vcf/GA4GHScheme.html
/usr/share/doc/libpicard-java/api/picard/vcf/GA4GHSchemeWithMissingAsHomRef.html
/usr/share/doc/libpicard-java/api/picard/vcf/GatherVcfs.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordance.Alleles.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordance.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceContingencyMetrics.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceCounts.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceDetailMetrics.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceScheme.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceSchemeFactory.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceStateCodes.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceStates.CallState.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceStates.ContingencyState.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceStates.TruthAndCallStates.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceStates.TruthState.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceStates.html
/usr/share/doc/libpicard-java/api/picard/vcf/GenotypeConcordanceSummaryMetrics.html
/usr/share/doc/libpicard-java/api/picard/vcf/GvcfMetricAccumulator.html
/usr/share/doc/libpicard-java/api/picard/vcf/LiftoverVcf.html
/usr/share/doc/libpicard-java/api/picard/vcf/MakeSitesOnlyVcf.html
/usr/share/doc/libpicard-java/api/picard/vcf/MergeVcfs.html
/usr/share/doc/libpicard-java/api/picard/vcf/PairedVariantSubContextIterator.VcfTuple.html
/usr/share/doc/libpicard-java/api/picard/vcf/PairedVariantSubContextIterator.html
/usr/share/doc/libpicard-java/api/picard/vcf/RenameSampleInVcf.html
/usr/share/doc/libpicard-java/api/picard/vcf/SortVcf.html
/usr/share/doc/libpicard-java/api/picard/vcf/SplitVcfs.html
/usr/share/doc/libpicard-java/api/picard/vcf/UpdateVcfSequenceDictionary.html
/usr/share/doc/libpicard-java/api/picard/vcf/VcfFormatConverter.html
/usr/share/doc/libpicard-java/api/picard/vcf/VcfToIntervalList.html
/usr/share/doc/libpicard-java/api/picard/vcf/package-frame.html
/usr/share/doc/libpicard-java/api/picard/vcf/package-summary.html
/usr/share/doc/libpicard-java/api/picard/vcf/package-tree.html
/usr/share/doc/libpicard-java/api/picard/vcf/MendelianViolations/FindMendelianViolations.html
/usr/share/doc/libpicard-java/api/picard/vcf/MendelianViolations/MendelianViolationMetrics.html
/usr/share/doc/libpicard-java/api/picard/vcf/MendelianViolations/MendelianViolationsByFamily.html
/usr/share/doc/libpicard-java/api/picard/vcf/MendelianViolations/package-frame.html
/usr/share/doc/libpicard-java/api/picard/vcf/MendelianViolations/package-summary.html
/usr/share/doc/libpicard-java/api/picard/vcf/MendelianViolations/package-tree.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/AlleleBalanceFilter.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/DepthFilter.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/FilterApplyingVariantIterator.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/FilterVcf.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/FisherStrandFilter.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/GenotypeFilter.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/GenotypeQualityFilter.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/QdFilter.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/VariantFilter.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/package-frame.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/package-summary.html
/usr/share/doc/libpicard-java/api/picard/vcf/filter/package-tree.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantAccumulatorExecutor.MultiThreadedChunkBased.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantAccumulatorExecutor.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantIteratorProducer.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantProcessor.Accumulator.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantProcessor.AccumulatorGenerator.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantProcessor.Builder.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantProcessor.ResultMerger.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VariantProcessor.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VcfFileSegment.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/VcfFileSegmentGenerator.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/package-frame.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/package-summary.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/package-tree.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/util/PredicateFilterDecoratingClosableIterator.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/util/package-frame.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/util/package-summary.html
/usr/share/doc/libpicard-java/api/picard/vcf/processor/util/package-tree.html

Changelog

See picard-tools_2.8.1+dfsg-3_all.deb changelog.

See Also

Package Description
libpicard-java_2.8.1+dfsg-3_all.deb Java library to manipulate SAM and BAM files
libpiccolo-java_1.2-1_all.deb toolkit for development of 2D structured graphics
libpicocontainer-java-doc_2.15-2_all.deb Java library implementing the Dependency Injection pattern -- docs
libpicocontainer-java_2.15-2_all.deb Java library implementing the Dependency Injection pattern
libpimcommon4_4.14.10-7_i386.deb library for common bits of KDEPIM
libpion-5.0_5.0.7+dfsg-4_i386.deb lightweight HTTP interface library - runtime files
libpion-dev_5.0.7+dfsg-4_i386.deb lightweight HTTP interface library - development files
libpion-doc_5.0.7+dfsg-4_all.deb lightweight HTTP interface library - documentation
libpion-plugins_5.0.7+dfsg-4_i386.deb lightweight HTTP interface library - plugins
libpipebang-camlp4-dev_113.00.00-2build1_i386.deb OCaml Syntax extension to transform pipe expressions
libpirl-java-doc_2.3.8-2_all.deb PIRL Java Packages Documentation
libpirl-java_2.3.8-2_all.deb PIRL Java Packages
libpisock-dev_0.12.5-dfsg-2build2_i386.deb development files for communicating with a PalmOS PDA
libpisock9_0.12.5-dfsg-2build2_i386.deb library for communicating with a PalmOS PDA
libpisync1_0.12.5-dfsg-2build2_i386.deb synchronization library for PalmOS devices
Advertisement
Advertisement