probcons-extra_1.12-11_amd64.deb


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Description

probcons-extra - Extra programs from the probcons package

Property Value
Distribution Ubuntu 18.04 LTS (Bionic Beaver)
Repository Ubuntu Universe amd64
Package filename probcons-extra_1.12-11_amd64.deb
Package name probcons-extra
Package version 1.12
Package release 11
Package architecture amd64
Package type deb
Category universe/science
Homepage http://probcons.stanford.edu/
License -
Maintainer Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Download size 35.45 KB
Installed size 125.00 KB
Contains the convert, project and makgnuplot programs from the probcons
package, which have been renamed to pc-compare, pc-project and pc-makegnuplot
respectively to avoid collisions with other program names. These programs are
mostly useful for testing purposes and are not required for the normal usage of
Probcons.
Probcons is a tool for generating multiple alignments of protein
sequences.

Alternatives

Package Version Architecture Repository
probcons-extra_1.12-11_i386.deb 1.12 i386 Ubuntu Universe
probcons-extra - - -

Requires

Name Value
libc6 >= 2.14
libgcc1 >= 1:3.0
libstdc++6 >= 5.2
probcons = 1.12-11

Download

Type URL
Mirror archive.ubuntu.com
Binary Package probcons-extra_1.12-11_amd64.deb
Source Package probcons

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install probcons-extra deb package:
    # sudo apt-get install probcons-extra

Files

Path
/usr/bin/pc-compare
/usr/bin/pc-makegnuplot
/usr/bin/pc-project
/usr/share/doc/probcons-extra
/usr/share/man/man1/pc-compare.1.gz
/usr/share/man/man1/pc-makegnuplot.1.gz
/usr/share/man/man1/pc-project.1.gz

Changelog

2016-07-29 - Canberk Koç <canberkkoc@gmail.com>
probcons (1.12-11) unstable; urgency=medium
[ Canberk Koç ]
* Team upload.
* Autopkgtest added.
* README.source added. 
[ Andreas Tille ]
* Packaging moved from SVN to Git
* hardening=+all
2015-12-15 - Andreas Tille <tille@debian.org>
probcons (1.12-10) unstable; urgency=medium
* Moved debian/upstream to debian/upstream/metadata
* cme fix dpkg-control
* DEP5 fix
* DEP3 fix
* Propagate hardening options
* spelling in manpage
* Fix Mayhem bugs
Closes: #716581, #716505
2012-04-03 - Andreas Tille <tille@debian.org>
probcons (1.12-9) unstable; urgency=low
[ Charles Plessy ]
* renamed debian/upstream-metadata.yaml to debian/upstream
[ Andreas Tille ]
* debian/upstream: Moved DOI+PMID to references
* debian/control:
- Standards-Version: 3.9.3 (no changes needed)
- Fixed Vcs fields
* debian/copyright: Uhmm, this package had no copyright file at all!
* debian/README.source: deleted redundant handling advises for quilt
* debian/{compat,control}: debhelper 9
2011-05-02 - Andreas Tille <tille@debian.org>
probcons (1.12-8) unstable; urgency=low
* Standards-Version: 3.9.2 (no changes needed)
* debian/patches/fix-gcc-4.6.patch: Fix gcc-4.6 build issue
Closes: #625036
2011-01-04 - Charles Plessy <plessy@debian.org>
probcons (1.12-7) unstable; urgency=low
* Use dh for debian/rules, which will also switch off parallel building
(Closes: #607729, #608710).
* Switch to Debhelper 8 (debian/control, debian/compat).
2010-12-21 - Andreas Tille <tille@debian.org>
probcons (1.12-6) unstable; urgency=low
* Use proper C++ headers to fix gcc version 4.3 and higher
issues (thanks for the patch to Matthias Klose)
Closes: 607728
2010-11-17 - Andreas Tille <tille@debian.org>
probcons (1.12-5) unstable; urgency=low
[ Charles Plessy ]
* debian/control: Enhances: t-coffee.
* Updated my email address.
[ David Paleino ]
* debian/control:
- bumped Standards-Version to 3.8.0
+ enabled parallel building in debian/rules
- removed myself from Uploaders (will work from behind the scenes ;) )
- updated debhelper dependency on >= 6 (also debian/compat)
[ Charles Plessy ]
* Documented information in ‘debian/upstream-metadata.yaml’.
* Removed mention of the bibliographic reference in ‘debian/control’.
[ Andreas Tille ]
* Added myself to uploaders
* Make sure Dm-Uploader-Allowed is lower case
Closes: #601509
* Standards-Version: 3.9.1 (no changes needed)
* Debhelper >= 7
-> debian/rules: s/dh_clean -k/dh_prep/
* Source-Format 3.0 (quilt)
* debian/README.source
2008-01-04 - Charles Plessy <charles-debian-nospam@plessy.org>
probcons (1.12-4) unstable; urgency=low
[ Charles Plessy ]
* debian/control:
- Moved the Homepage: field out from the package's description.
- Allowed upload by Debian Maintainers.
- Checked the compliance with Policy 3.7.3
* debian/patches:
- swiched to quilt
- added a fix to build with GCC 4.3 (Closes: #455625)
* debian/rules:
- modify Main-RNA.cc so that it uses Defaults-RNA.h (Closes: #458926)
* debian/copyright:
- converted to machine-readable format.
[ David Paleino ]
* debian/probcons.1, debian/probcons-RNA.1, debian/pc-compare.1,
debian/pc-makegnuplot.1, debian/pc-project.1 added - these
have been statically built.
* debian/control:
- B-D updated
- added myself to Uploaders
* debian/rules:
- manpages statically built
- minor changes
2007-05-16 - Charles Plessy <charles-debian-nospam@plessy.org>
probcons (1.12-3) unstable; urgency=low
* Fixed typos which caused incomplete cleaning (Closes: #424301).
* Fixed double-building of binaries and manpages.
2007-04-18 - Charles Plessy <charles-debian-nospam@plessy.org>
probcons (1.12-2) unstable; urgency=low
* Corrected an error in the build rules making probcons-RNA, which
prevented it to benefit from the fixes on probcons.
(Closes: #417482) (again!)

See Also

Package Description
probcons_1.12-11_amd64.deb PROBabilistic CONSistency-based multiple sequence alignment
probert_0.0.14.1build2_amd64.deb Hardware probing tool
procenv_0.50-1_amd64.deb Utility to show process environment
procinfo_2.0.304-3_amd64.deb tools to display information from /proc and /sys
procmail-lib_2009.1202-4_all.deb procmail library of plug-in recipes
procmeter3_3.6-1_amd64.deb graphical system status monitor
procserv_2.7.0-1_amd64.deb Process server with telnet console and log access
procyon-decompiler_0.5.32-3_all.deb Procyon Java Decompiler
proda_1.0-11_amd64.deb multiple alignment of protein sequences
prodigal_2.6.3-1_amd64.deb Microbial (bacterial and archaeal) gene finding program
profanity_0.5.1-3_amd64.deb console based XMPP client
profbval_1.0.22-5_all.deb predictor of flexible/rigid protein residues from sequence
profile-sync-daemon_6.31-1_all.deb Symlink and sync browser profile directories into RAM
profisis_1.0.11-4_all.deb prediction of protein-protein interaction sites from sequence
profitbricks-api-tools_4.1.1-1_all.deb command line tools that use the public API from ProfitBricks
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