python-pbsuite-utils_15.8.24+dfsg-2_all.deb


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Description

python-pbsuite-utils - software for Pacific Biosciences sequencing data -- Python utilities

Property Value
Distribution Ubuntu 17.10 (Artful Aardvark)
Repository Ubuntu Universe i386
Package name python-pbsuite-utils
Package version 15.8.24+dfsg
Package release 2
Package architecture all
Package type deb
Installed size 6.40 KB
Download size 493.64 KB
Official Mirror archive.ubuntu.com
The PBSuite currently contains two projects created and maintained
by Adam English for analysis of Pacific Biosciences long-read
sequencing data.
* PBJelly - genome upgrading tool
* PBHoney - structural variation discovery
This package contains Python 2 utilities for the suite.

Alternatives

Package Version Architecture Repository
python-pbsuite-utils_15.8.24+dfsg-2_all.deb 15.8.24+dfsg all Ubuntu Universe
python-pbsuite-utils - - -

Requires

Name Value
python-pysam >= 0.8.0
python:any << 2.8
python:any >= 2.7.5-5~

Download

Type URL
Binary Package python-pbsuite-utils_15.8.24+dfsg-2_all.deb
Source Package pbsuite

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install python-pbsuite-utils deb package:
    # sudo apt-get install python-pbsuite-utils

Files

Path
/usr/lib/python2.7/dist-packages/pbsuite/__init__.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/BamStat.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/BedIO.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/CommandRunner.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/FileHandlers.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/VCFIO.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/__init__.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/bamToFastq.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/blasrToBed.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/fakeQuals.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/fastqDivide.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/fastqSplit.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/jellyoutputrename.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/longCCSCombine.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/mapStats.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/mergeFaQu.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/quickN50.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/readSummary.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/setupLogging.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/summarizeAssembly.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplate.vcf
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/SVTemplate.vcf
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/eeasmIns_actual.e12048212
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/eeasmIns_actual.o12048212
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/output
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/phased.snps.vcf
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/spotToVCF.py
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/spots.vcf
/usr/lib/python2.7/dist-packages/pbsuite/utils/vcfTemplates/test.vcf
/usr/share/doc/python-pbsuite-utils/changelog.Debian.gz
/usr/share/doc/python-pbsuite-utils/copyright

Changelog

See pbsuite_15.8.24+dfsg-2_all.deb changelog.

See Also

Package Description
python-pcapy_0.10.8-1build1_i386.deb Python interface to the libpcap packet capture library
python-pcl-msgs_0.2.0-6_all.deb Python code for PCL-related Robot OS Messages
python-pcp_3.12.1_i386.deb Performance Co-Pilot Python PMAPI module
python-pcs_0.6+debian-0ubuntu3_i386.deb Packet Construction Set for Python
python-pdal_1.5.0+ds-2_i386.deb Point Data Abstraction Library - Python 2 extension
python-pdfkit_0.5.0-1_all.deb Python wrapper for wkhtmltopdf to convert HTML to PDF (Python 2)
python-pdfminer_20140328+dfsg-1_all.deb PDF parser and analyser
python-pdfrw-doc_0.2-3_all.deb PDF file manipulation library (documentation)
python-pdfrw_0.2-3_all.deb PDF file manipulation library (Python 2)
python-pdftools_0.37-4_all.deb PDF document reading classes
python-peak.rules_0.5a1+r2713-1_all.deb generic functions support for Python
python-peak.util.decorators_1.8-3_all.deb version-agnostic decorators support for Python
python-peak.util_20160204-1_all.deb utilities from the Python Enterprise Application Kit
python-pebl-doc_1.0.2-4_all.deb Python Environment for Bayesian Learning - documentation
python-pebl_1.0.2-4_i386.deb Python Environment for Bayesian Learning
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