python-pbbanana_15.8.24+dfsg-2_all.deb


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Description

python-pbbanana - additional utilities for the pbsuite

Property Value
Distribution Ubuntu 17.10 (Artful Aardvark)
Repository Ubuntu Universe i386
Package name python-pbbanana
Package version 15.8.24+dfsg
Package release 2
Package architecture all
Package type deb
Installed size 76 B
Download size 16.17 KB
Official Mirror archive.ubuntu.com
PBBanana contains some assembly and consensus utilities
for the PBSuite.
* OLCAssembly - A shortcut to calling pacbio's Allora Assembler
* Polish - A quick consensus caller
* PBJNovo - DeNovo Assembler of PacBio only reads
This package is intended for use internally by the PBSuite

Alternatives

Package Version Architecture Repository
python-pbbanana_15.8.24+dfsg-2_all.deb 15.8.24+dfsg all Ubuntu Universe
python-pbbanana - - -

Requires

Name Value
blasr -
pbjelly = 15.8.24+dfsg-2
python-networkx -
python-pbsuite-utils = 15.8.24+dfsg-2
python:any << 2.8
python:any >= 2.7.5-5~

Download

Type URL
Binary Package python-pbbanana_15.8.24+dfsg-2_all.deb
Source Package pbsuite

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install python-pbbanana deb package:
    # sudo apt-get install python-pbbanana

Files

Path
/usr/lib/python2.7/dist-packages/pbsuite/banana/Banana.py
/usr/lib/python2.7/dist-packages/pbsuite/banana/MakeOverlapTable.py
/usr/lib/python2.7/dist-packages/pbsuite/banana/MakeReciprocal.py
/usr/lib/python2.7/dist-packages/pbsuite/banana/OLCAssembly.py
/usr/lib/python2.7/dist-packages/pbsuite/banana/Polish.py
/usr/lib/python2.7/dist-packages/pbsuite/banana/SeqAsm.py
/usr/lib/python2.7/dist-packages/pbsuite/banana/__init__.py
/usr/lib/python2.7/dist-packages/pbsuite/banana/chunkyBlasr.py
/usr/share/doc/python-pbbanana/BananaReadme.txt
/usr/share/doc/python-pbbanana/changelog.Debian.gz
/usr/share/doc/python-pbbanana/copyright

Changelog

See pbsuite_15.8.24+dfsg-2_all.deb changelog.

See Also

Package Description
python-pbcommand_0.5.3-1_all.deb common command-line interface for Pacific Biosciences analysis modules
python-pbconsensuscore_1.0.2-2build2_i386.deb algorithms for PacBio multiple sequence consensus -- Python 2
python-pbcore-doc_1.2.11+dfsg-1ubuntu1_all.deb Python library for processing PacBio data files (documentation)
python-pbcore_1.2.11+dfsg-1ubuntu1_all.deb Python library for processing PacBio data files
python-pbgenomicconsensus_2.1.0-1_all.deb Pacific Biosciences variant and consensus caller (Python 2)
python-pbh5tools-doc_0.8.0+dfsg-5build1_all.deb tools for manipulating HDF5 files produced by Pacific Biosciences (doc)
python-pbkdf2_1.3+20110613.git2a0fb15~ds0-3_all.deb Python RSA PKCS#5 v2.0 module (Python 2)
python-pbsuite-utils_15.8.24+dfsg-2_all.deb software for Pacific Biosciences sequencing data -- Python utilities
python-pcapy_0.10.8-1build1_i386.deb Python interface to the libpcap packet capture library
python-pcl-msgs_0.2.0-6_all.deb Python code for PCL-related Robot OS Messages
python-pcp_3.12.1_i386.deb Performance Co-Pilot Python PMAPI module
python-pcs_0.6+debian-0ubuntu3_i386.deb Packet Construction Set for Python
python-pdal_1.5.0+ds-2_i386.deb Point Data Abstraction Library - Python 2 extension
python-pdfkit_0.5.0-1_all.deb Python wrapper for wkhtmltopdf to convert HTML to PDF (Python 2)
python-pdfminer_20140328+dfsg-1_all.deb PDF parser and analyser
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