python-bioblend_0.7.0-2_all.deb


Advertisement

Description

python-bioblend - CloudMan and Galaxy API library (Python 2)

Property Value
Distribution Ubuntu 17.10 (Artful Aardvark)
Repository Ubuntu Universe i386
Package name python-bioblend
Package version 0.7.0
Package release 2
Package architecture all
Package type deb
Installed size 389 B
Download size 90.63 KB
Official Mirror archive.ubuntu.com
BioBlend is a Python library for interacting with CloudMan and Galaxy's API.
BioBlend is supported and tested on:
· Python 2.6, 2.7, 3.3 and 3.4
· Galaxy release_14.02 and later.
Conceptually, it makes it possible to script and automate  the  process
of cloud infrastructure provisioning and scaling via CloudMan, and run‐
ning of analyses via Galaxy. In reality, it makes  it  possible  to  do
things like this:
· Create  a CloudMan compute cluster, via an API and directly from your
local machine:
· Reconnect to an existing CloudMan instance and manipulate it
· Interact with Galaxy via a straightforward API
Although this library allows you to blend these two services into  a
cohesive  unit,  the  library itself can be used with either service
irrespective of the other. For example,  you  can  use  it  to  just
manipulate  CloudMan  clusters or to script the interactions with an
instance of Galaxy running on your laptop.
This package installs the library for Python 2.

Alternatives

Package Version Architecture Repository
python-bioblend_0.7.0-2_all.deb 0.7.0 all Ubuntu Universe
python-bioblend - - -

Requires

Name Value
python-boto -
python-requests -
python-requests-toolbelt -
python-six -
python-yaml -
python:any << 2.8
python:any >= 2.7.5-5~

Conflicts

Name Value
python3-bioblend -

Download

Type URL
Binary Package python-bioblend_0.7.0-2_all.deb
Source Package python-bioblend

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install python-bioblend deb package:
    # sudo apt-get install python-bioblend

Files

Path
/usr/lib/python2.7/dist-packages/bioblend/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/config.py
/usr/lib/python2.7/dist-packages/bioblend/galaxyclient.py
/usr/lib/python2.7/dist-packages/bioblend-0.7.0.egg-info/PKG-INFO
/usr/lib/python2.7/dist-packages/bioblend-0.7.0.egg-info/dependency_links.txt
/usr/lib/python2.7/dist-packages/bioblend-0.7.0.egg-info/requires.txt
/usr/lib/python2.7/dist-packages/bioblend-0.7.0.egg-info/top_level.txt
/usr/lib/python2.7/dist-packages/bioblend/cloudman/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/cloudman/launch.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/client.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/config/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/dataset_collections/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/datasets/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/datatypes/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/folders/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/forms/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/ftpfiles/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/genomes/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/groups/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/histories/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/jobs/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/libraries/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/objects/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/objects/client.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/objects/galaxy_instance.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/objects/wrappers.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/quotas/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/roles/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/tool_data/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/tools/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/tools/inputs.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/toolshed/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/users/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/visual/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/galaxy/workflows/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/toolshed/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/toolshed/repositories/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/toolshed/tools/__init__.py
/usr/lib/python2.7/dist-packages/bioblend/util/__init__.py
/usr/share/doc/python-bioblend/README.Debian
/usr/share/doc/python-bioblend/changelog.Debian.gz
/usr/share/doc/python-bioblend/copyright
/usr/share/man/man1/bioblend.1.gz

Changelog

2016-07-06 - Ondřej Nový <onovy@debian.org>
python-bioblend (0.7.0-2) unstable; urgency=medium
* Team upload.
* Fixed Vcs- urls
* Added python3-sphinx to build depends
* Fixed JS dependency and links in docs (Closes: #829657)
* wrap-and-sort -t -a
* Removed pre-wheezy versioned dependency of python-all
* Added autopkgtest-pkg-python testsuite
2016-06-28 - Steffen Moeller <moeller@debian.org>
python-bioblend (0.7.0-1) unstable; urgency=medium
* Initial release (Closes: #829017)

See Also

Package Description
python-biom-format-doc_2.1.5+dfsg-7build2_all.deb documentation for BIOM format
python-biom-format_2.1.5+dfsg-7build2_i386.deb Biological Observation Matrix (BIOM) format (Python 2)
python-biomaj3_3.0.20-1_all.deb biological data-bank updater (Python 2)
python-biopython-doc_1.70+dfsg-2build1_all.deb Documentation for the Biopython library
python-biopython-sql_1.70+dfsg-2build1_all.deb Biopython support for the BioSQL database schema (Python 2)
python-biopython_1.70+dfsg-2build1_i386.deb Python library for bioinformatics (implemented in Python 2)
python-biosig_1.3.0-2.2build1_i386.deb Python bindings for BioSig library
python-biotools_1.2.12-1_i386.deb Python bioinformatics utilities for high-throughput genomic sequencing
python-biplist_1.0.2-1_all.deb Python 2 library for reading/writing Mac OS X binary plists
python-bitarray_0.8.1-1build4_i386.deb Python module for efficient boolean array handling
python-bitbucket_0.1-1_all.deb Python bindings for the bitbucket.org REST API
python-bitstring-doc_3.1.5-1_all.deb Python module for manipulation of binary data (documentation)
python-bitstring_3.1.5-1_all.deb Python module for manipulation of binary data (Python 2)
python-bitstruct_3.4.0-1_all.deb Python bit pack/unpack package
python-bittorrent_3.4.2-12_all.deb Scatter-gather network file transfer
Advertisement
Advertisement