proftmb_1.1.12-6build1_i386.deb


Advertisement

Description

proftmb - per-residue prediction of bacterial transmembrane beta barrels

Property Value
Distribution Ubuntu 17.10 (Artful Aardvark)
Repository Ubuntu Universe i386
Package name proftmb
Package version 1.1.12
Package release 6build1
Package architecture i386
Package type deb
Installed size 890 B
Download size 402.97 KB
Official Mirror archive.ubuntu.com
proftmb predicts transmembrane beta-barrel (TMB) proteins in Gram-negative
bacteria.
For each query protein, proftmb provides both a Z-value indicating that the
protein actually contains a membrane barrel, and a four-state per-residue
labeling of upward- and downward-facing strands, periplasmic hairpins and
extracellular loops.

Alternatives

Package Version Architecture Repository
proftmb_1.1.12-6build1_amd64.deb 1.1.12 amd64 Ubuntu Universe
proftmb - - -

Requires

Name Value
libc6 >= 2.11
libgcc1 >= 1:3.0
libgsl23 -
libstdc++6 >= 5.2

Download

Type URL
Binary Package proftmb_1.1.12-6build1_i386.deb
Source Package proftmb

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install proftmb deb package:
    # sudo apt-get install proftmb

Files

Path
/usr/bin/proftmb
/usr/share/doc/proftmb/README
/usr/share/doc/proftmb/README.test
/usr/share/doc/proftmb/changelog.Debian.gz
/usr/share/doc/proftmb/copyright
/usr/share/doc/proftmb/installation-test
/usr/share/doc/proftmb/examples/16761001.Q
/usr/share/doc/proftmb/examples/1a0s_P.f.1.Q.gz
/usr/share/doc/proftmb/examples/1af6_A.f.2.Q.gz
/usr/share/doc/proftmb/examples/1bt9_A.f.3.Q.gz
/usr/share/doc/proftmb/examples/1fep_A.f.4.Q.gz
/usr/share/doc/proftmb/examples/1prn.f.5.Q.gz
/usr/share/doc/proftmb/examples/1qd5_A.f.6.Q.gz
/usr/share/doc/proftmb/examples/1qj9_A.f.7.Q.gz
/usr/share/doc/proftmb/examples/1qjp_A.f.8.Q.gz
/usr/share/doc/proftmb/examples/CADN_HUMAN.Q.gz
/usr/share/doc/proftmb/examples/YQIB_ECOLI.Q.gz
/usr/share/doc/proftmb/examples/example.Q
/usr/share/doc/proftmb/examples/example_dat.txt.gz
/usr/share/doc/proftmb/examples/example_proftmb_pretty.txt
/usr/share/doc/proftmb/examples/example_proftmb_tabular.txt
/usr/share/man/man1/proftmb.1.gz
/usr/share/proftmb/Makefile
/usr/share/proftmb/Makefile.am
/usr/share/proftmb/Makefile.in
/usr/share/proftmb/ModelArchitecture
/usr/share/proftmb/NCBIGnegComp
/usr/share/proftmb/ReduxDecode4
/usr/share/proftmb/StateRedux4
/usr/share/proftmb/StrandStates
/usr/share/proftmb/Swiss8.arch
/usr/share/proftmb/Swiss8.params
/usr/share/proftmb/Swiss_Zcurve
/usr/share/proftmb/TrainedParams
/usr/share/proftmb/ZCalibration
/usr/share/proftmb/bact.comp
/usr/share/proftmb/options
/usr/share/proftmb/proftmb.opt

Changelog

2017-08-06 - Matthias Klose <doko@ubuntu.com>
proftmb (1.1.12-6build1) artful; urgency=medium
* No-change rebuild for libgsl soname change.
2016-07-16 - Tatiana Malygina <merlettaia@gmail.com>
proftmb (1.1.12-6) unstable; urgency=medium
* Team upload.
* add allow-stderr restriction to debian/tests/control, since proftmb writes
some output messages (not errors) to stderr. Other solution would be to run
proftmb with --quiet flag - but this is more informative.
2016-07-04 - Gert Wollny <gw.fossdev@gmail.com>
proftmb (1.1.12-5) unstable; urgency=medium
* Team upload.
* d/p/gcc-6: Fix compilation with gcc-6, Closes:  #811830
2016-06-21 - Tatiana Malygina <merlettaia@gmail.com>
proftmb (1.1.12-4) unstable; urgency=medium
[ Tatiana Malygina ]
* Team upload.
* Add testsuite + README.test + docs file
* cme fix dpkg-control
* fix in testsuite control file (removed accidentally added allow-stderr 
restriction)
[ Andreas Tille ]
* Secure Vcs-Browser
* Better hardening
2015-12-07 - Andreas Tille <tille@debian.org>
proftmb (1.1.12-3) unstable; urgency=medium
[ Bas Couwenberg ]
* Update build dependencies for GSL 2, change libgsl0-dev to libgsl-dev.
Closes: #807222
[ Andreas Tille ]
* cme fix dpkg-control
* DEP5 fix
2014-06-03 - Andreas Tille <tille@debian.org>
proftmb (1.1.12-2) unstable; urgency=medium
[ Andreas Tille ]
* moved debian/upstream to debian/upstream/metadata
[ Cyril Brulebois ]
* Replace 'dnl' with '#' in src/Makefile.{am,in} (Closes: #750165).
[ Andreas Tille ]
* cme fix dpkg-control
* Priority: optional
* debhelper 9
* simplify debian/rules
2012-09-20 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.12-1) unstable; urgency=low
* New upstream release.
2012-09-04 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.11-1) unstable; urgency=low
* Added debug package.
* New upstream release.
2012-02-20 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.10-1) unstable; urgency=low
* New upstream release
2012-02-17 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.9-1) unstable; urgency=low
* New upstream release

See Also

Package Description
proftpd-basic_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - binaries
proftpd-dev_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - development files
proftpd-doc_1.3.5d-1_all.deb Versatile, virtual-hosting FTP daemon - documentation
proftpd-mod-autohost_0.4-1build7_i386.deb ProFTPD module mod_autohost
proftpd-mod-case_0.7-1build6_i386.deb ProFTPD module mod_case
proftpd-mod-clamav_0.14~rc2-1build1_i386.deb ProFTPD module mod_clamav
proftpd-mod-dnsbl_0.1.5-4build2_i386.deb ProFTPD module mod_dnsbl
proftpd-mod-fsync_0.2-1build7_i386.deb ProFTPD module mod_fsync
proftpd-mod-geoip_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - GeoIP module
proftpd-mod-ldap_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - LDAP module
proftpd-mod-msg_0.4.1-1.1build6_i386.deb ProFTPD module mod_msg
proftpd-mod-mysql_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - MySQL module
proftpd-mod-odbc_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - ODBC module
proftpd-mod-pgsql_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - PostgreSQL module
proftpd-mod-sqlite_1.3.5d-1_i386.deb Versatile, virtual-hosting FTP daemon - SQLite3 module
Advertisement
Advertisement