tree-ppuzzle_5.2-8build1_i386.deb


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Description

tree-ppuzzle - Parallelized reconstruction of phylogenetic trees by maximum likelihood

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe i386
Package name: tree-ppuzzle
Package version: 5.2
Package release: 8build1
Package architecture: i386
Package type: deb
Installed size: 332 B
Download size: 126.22 KB
Official Mirror: archive.ubuntu.com
TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment. This is the parallelized version of tree-puzzle.

Alternatives

    Download

    Source package: tree-puzzle

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install tree-ppuzzle deb package:
      # sudo apt-get install tree-ppuzzle

    Files

    • /usr/bin/tree-ppuzzle
    • /usr/share/doc/tree-ppuzzle/AUTHORS
    • /usr/share/doc/tree-ppuzzle/README
    • /usr/share/doc/tree-ppuzzle/README.Debian
    • /usr/share/doc/tree-ppuzzle/changelog.Debian.gz
    • /usr/share/doc/tree-ppuzzle/copyright
    • /usr/share/man/man1/tree-ppuzzle.1.gz
    • /usr/share/menu/tree-ppuzzle
    • /usr/share/pixmaps/tree-ppuzzle.xpm

    Changelog

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