theseus_3.3.0-4build1_i386.deb


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Description

theseus - superimpose macromolecules using maximum likelihood

Property Value
Distribution Ubuntu 16.04 LTS (Xenial Xerus)
Repository Ubuntu Universe i386
Package name theseus
Package version 3.3.0
Package release 4build1
Package architecture i386
Package type deb
Installed size 848 B
Download size 282.16 KB
Official Mirror archive.ubuntu.com
Theseus is a program that simultaneously superimposes multiple
macromolecular structures. Theseus finds the optimal solution to the
superposition problem using the method of maximum likelihood. By
down-weighting variable regions of the superposition and by correcting for
correlations among atoms, the ML superposition method produces very
accurate structural alignments.
When macromolecules with different residue sequences are superimposed,
other programs and algorithms discard residues that are aligned with
gaps. Theseus, however, uses a novel superimposition algorithm that
includes all of the data.

Alternatives

Package Version Architecture Repository
theseus_3.3.0-4build1_amd64.deb 3.3.0 amd64 Ubuntu Universe
theseus - - -

Requires

Name Value
clustalo -
libc6 >= 2.15
libgsl2 -

Download

Type URL
Binary Package theseus_3.3.0-4build1_i386.deb
Source Package theseus

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install theseus deb package:
    # sudo apt-get install theseus

Files

Path
/usr/bin/theseus
/usr/bin/theseus_align
/usr/share/doc/theseus/README.Debian
/usr/share/doc/theseus/README.test
/usr/share/doc/theseus/changelog.Debian.gz
/usr/share/doc/theseus/copyright
/usr/share/man/man1/theseus.1.gz
/usr/share/man/man1/theseus_align.1.gz

Changelog

2015-12-08 - Michael Terry <mterry@ubuntu.com>
theseus (3.3.0-4build1) xenial; urgency=medium
* Rebuild against new gsl SONAME change.
2015-11-25 - Andreas Tille <tille@debian.org>
theseus (3.3.0-4) unstable; urgency=medium
* Enable building arch independent packages separately
Closes: #806223
* Build against libgsl-dev (version 2) rather than libgsl0-dev
* Add autopkgtest
2015-07-07 - Andreas Tille <tille@debian.org>
theseus (3.3.0-3) unstable; urgency=medium
* Fix versioning which really
Closes: #790515
2015-07-01 - Andreas Tille <tille@debian.org>
theseus (3.3.0-2) unstable; urgency=medium
* Fix package split issue
Closes: #790515
2015-06-28 - Andreas Tille <tille@debian.org>
theseus (3.3.0-1) unstable; urgency=medium
* New upstream version
* Add missing license statement
Closes: #790311
2015-05-21 - Andreas Tille <tille@debian.org>
theseus (3.1.1-1) unstable; urgency=medium
* New upstream version
* cme fix dpkg-control
* Split examples into separate binary package
* update debian/copyright
2014-05-20 - Andreas Tille <tille@debian.org>
theseus (3.0.0-1) unstable; urgency=medium
* New upstream version
* Moved debian/upstream to debian/upstream/metadata
* cme fix dpkg-control
* debian/README.source: removed since redundant
2013-06-26 - Andreas Tille <tille@debian.org>
theseus (2.0.6-1) unstable; urgency=low
* New upstream version
- Adapt patches
- debian/patches/30_fix_gcc_options.patch: Enable build on Linux
Closes: #713461
* debian/control:
- Remove DM-Upload-Allowed
- cme fix dpkg-control
* debian/rules: use xz compression
2012-10-11 - Andreas Tille <tille@debian.org>
theseus (2.0.1-1) experimental; urgency=low
* New upstream version (most patches applied)
* debian/control:
- Fix typo: s/clustlaw/clustalw/
Closes: #682994
- Standards-Version: 3.9.4 (no changes needed)
* removed debian/citation.bib because the very same information
is now in debian/upstream
2012-06-08 - Andreas Tille <tille@debian.org>
theseus (1.6.2-2) unstable; urgency=low
* debian/upstream: Added missing space, fixed Name
* debian/patches: Two patches from Simon Ruderich
<simon@ruderich.org> to enable hardening (thanks to Simon)
Closes: #668120

See Also

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threadscope_0.2.6-5_i386.deb graphical thread profiler for Haskell programs
thrift-compiler_0.9.1-2_i386.deb code generator/compiler for Thrift definitions
thuban-doc_1.2.2-9build1_all.deb Interactive geographic data viewer - documentation
thuban_1.2.2-9build1_i386.deb Interactive geographic data viewer
thumbnailer-service_2.4+16.04.20160321-0ubuntu1_i386.deb D-Bus service for out of process thumbnailing
thunar-archive-plugin_0.3.1-4_i386.deb Archive plugin for Thunar file manager
thunar-data_1.6.10-2ubuntu1_all.deb Provides thunar documentation, icons and translations
thunar-dropbox-plugin_0.2.1+dfsg1-2_i386.deb context-menu items from dropbox for Thunar
thunar-gtkhash_0.7.0-2_i386.deb thunar extension for computing checksums and more using gtkhash
thunar-media-tags-plugin_0.2.1-1_i386.deb Media tags plugin for Thunar file manager
thunar-vcs-plugin_0.1.4-2build1_i386.deb VCS plugin for Thunar file manager
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