theseus_3.3.0-4build1_i386.deb


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Description

theseus - superimpose macromolecules using maximum likelihood

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe i386
Package name: theseus
Package version: 3.3.0
Package release: 4build1
Package architecture: i386
Package type: deb
Installed size: 848 B
Download size: 282.16 KB
Official Mirror: archive.ubuntu.com
Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments. When macromolecules with different residue sequences are superimposed, other programs and algorithms discard residues that are aligned with gaps. Theseus, however, uses a novel superimposition algorithm that includes all of the data.

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    Source package: theseus

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install theseus deb package:
      # sudo apt-get install theseus

    Files

    • /usr/bin/theseus
    • /usr/bin/theseus_align
    • /usr/share/doc/theseus/README.Debian
    • /usr/share/doc/theseus/README.test
    • /usr/share/doc/theseus/changelog.Debian.gz
    • /usr/share/doc/theseus/copyright
    • /usr/share/man/man1/theseus.1.gz
    • /usr/share/man/man1/theseus_align.1.gz

    Changelog

    2015-12-08 - Michael Terry <mterry@ubuntu.com> theseus (3.3.0-4build1) xenial; urgency=medium * Rebuild against new gsl SONAME change.

    2015-11-25 - Andreas Tille <tille@debian.org> theseus (3.3.0-4) unstable; urgency=medium * Enable building arch independent packages separately Closes: #806223 * Build against libgsl-dev (version 2) rather than libgsl0-dev * Add autopkgtest

    2015-07-07 - Andreas Tille <tille@debian.org> theseus (3.3.0-3) unstable; urgency=medium * Fix versioning which really Closes: #790515

    2015-07-01 - Andreas Tille <tille@debian.org> theseus (3.3.0-2) unstable; urgency=medium * Fix package split issue Closes: #790515

    2015-06-28 - Andreas Tille <tille@debian.org> theseus (3.3.0-1) unstable; urgency=medium * New upstream version * Add missing license statement Closes: #790311

    2015-05-21 - Andreas Tille <tille@debian.org> theseus (3.1.1-1) unstable; urgency=medium * New upstream version * cme fix dpkg-control * Split examples into separate binary package * update debian/copyright

    2014-05-20 - Andreas Tille <tille@debian.org> theseus (3.0.0-1) unstable; urgency=medium * New upstream version * Moved debian/upstream to debian/upstream/metadata * cme fix dpkg-control * debian/README.source: removed since redundant

    2013-06-26 - Andreas Tille <tille@debian.org> theseus (2.0.6-1) unstable; urgency=low * New upstream version - Adapt patches - debian/patches/30_fix_gcc_options.patch: Enable build on Linux Closes: #713461 * debian/control: - Remove DM-Upload-Allowed - cme fix dpkg-control * debian/rules: use xz compression

    2012-10-11 - Andreas Tille <tille@debian.org> theseus (2.0.1-1) experimental; urgency=low * New upstream version (most patches applied) * debian/control: - Fix typo: s/clustlaw/clustalw/ Closes: #682994 - Standards-Version: 3.9.4 (no changes needed) * removed debian/citation.bib because the very same information is now in debian/upstream

    2012-06-08 - Andreas Tille <tille@debian.org> theseus (1.6.2-2) unstable; urgency=low * debian/upstream: Added missing space, fixed Name * debian/patches: Two patches from Simon Ruderich <simon@ruderich.org> to enable hardening (thanks to Simon) Closes: #668120

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