tantan_13-2_i386.deb


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Description

tantan - low complexity and tandem repeat masker for biosequences

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe i386
Package name: tantan
Package version: 13
Package release: 2
Package architecture: i386
Package type: deb
Installed size: 103 B
Download size: 37.84 KB
Official Mirror: archive.ubuntu.com
tantan is a tool to mask simple regions (low complexity and short-period tandem repeats) in DNA, RNA, and protein sequences. The aim of tantan is to prevent false predictions when searching for homologous regions between two sequences. Simple repeats often align strongly to each other, causing false homology predictions.

Alternatives

    Download

    Binary package: tantan_13-2_i386.deb
    Source package: tantan

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install tantan deb package:
      # sudo apt-get install tantan

    Files

    • /usr/bin/tantan
    • /usr/share/doc/tantan/changelog.Debian.gz
    • /usr/share/doc/tantan/copyright
    • /usr/share/man/man1/tantan.1.gz

    Changelog

    2016-02-15 - Sascha Steinbiss <sascha@steinbiss.name> tantan (13-2) unstable; urgency=medium * Migrate package to Git * Fix buildflags and remove override * Use secure Vcs-Git

    2015-08-04 - Sascha Steinbiss <sascha@steinbiss.name> tantan (13-1) unstable; urgency=low * Initial release (Closes: #793907) * Add missing copyright holder in d/copyright * Fix machine readable license code

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