t-coffee-examples_11.00.8cbe486-2_all.deb


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Description

t-coffee-examples - annotated examples for the use of T-Coffee

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe i386
Package name: t-coffee-examples
Package version: 11.00.8cbe486
Package release: 2
Package architecture: all
Package type: deb
Installed size: 4.57 KB
Download size: 510.44 KB
Official Mirror: archive.ubuntu.com
To help increasing the proficiency in the use of T-Coffee, this package provides examples for input sequences and their proper alignment.

Alternatives

    Download

    Source package: t-coffee

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install t-coffee-examples deb package:
      # sudo apt-get install t-coffee-examples

    Files

    • /usr/share/doc/t-coffee-examples/1D4V-1.pdb
    • /usr/share/doc/t-coffee-examples/1D4V-2.pdb
    • /usr/share/doc/t-coffee-examples/1D4V-3.pdb
    • /usr/share/doc/t-coffee-examples/1EXT-1.pdb
    • /usr/share/doc/t-coffee-examples/1EXT-2.pdb
    • /usr/share/doc/t-coffee-examples/1EXT-3.pdb
    • /usr/share/doc/t-coffee-examples/1EXT-4.pdb
    • /usr/share/doc/t-coffee-examples/1JMA-1.pdb
    • /usr/share/doc/t-coffee-examples/1JMA-2.pdb
    • /usr/share/doc/t-coffee-examples/1OQE-1.pdb
    • /usr/share/doc/t-coffee-examples/1SG1-1.pdb
    • /usr/share/doc/t-coffee-examples/1SG1-2.pdb
    • /usr/share/doc/t-coffee-examples/1SG1-3.pdb
    • /usr/share/doc/t-coffee-examples/1SG1-4.pdb
    • /usr/share/doc/t-coffee-examples/1XU1-2.pdb
    • /usr/share/doc/t-coffee-examples/1XU2-1.pdb
    • /usr/share/doc/t-coffee-examples/2HEY-1.pdb
    • /usr/share/doc/t-coffee-examples/2HEY-2.pdb
    • /usr/share/doc/t-coffee-examples/2HEY-4.pdb
    • /usr/share/doc/t-coffee-examples/2RPJ-1.pdb
    • /usr/share/doc/t-coffee-examples/2UWI-1.pdb
    • /usr/share/doc/t-coffee-examples/2UWI-2.pdb
    • /usr/share/doc/t-coffee-examples/2UWI-3.pdb
    • /usr/share/doc/t-coffee-examples/2seqs.fas
    • /usr/share/doc/t-coffee-examples/3d.aln
    • /usr/share/doc/t-coffee-examples/3d.dnd
    • /usr/share/doc/t-coffee-examples/3d.fasta
    • /usr/share/doc/t-coffee-examples/3d_sample2.fasta
    • /usr/share/doc/t-coffee-examples/3d_sample3.fasta
    • /usr/share/doc/t-coffee-examples/3d_sample4.aln
    • /usr/share/doc/t-coffee-examples/3d_sample5.aln
    • /usr/share/doc/t-coffee-examples/3d_sample5.template_list
    • /usr/share/doc/t-coffee-examples/b30.aln
    • /usr/share/doc/t-coffee-examples/block1.aln
    • /usr/share/doc/t-coffee-examples/block2.aln
    • /usr/share/doc/t-coffee-examples/cache
    • /usr/share/doc/t-coffee-examples/changelog.Debian.gz
    • /usr/share/doc/t-coffee-examples/charge_relay_lib.tc_lib
    • /usr/share/doc/t-coffee-examples/combined_aln.aln
    • /usr/share/doc/t-coffee-examples/combined_aln.aln.aln
    • /usr/share/doc/t-coffee-examples/command_line.txt
    • /usr/share/doc/t-coffee-examples/copyright
    • /usr/share/doc/t-coffee-examples/error_report.T-COFFEE
    • /usr/share/doc/t-coffee-examples/g0.aln
    • /usr/share/doc/t-coffee-examples/g10.aln
    • /usr/share/doc/t-coffee-examples/g15.aln
    • /usr/share/doc/t-coffee-examples/g5.aln
    • /usr/share/doc/t-coffee-examples/kinases.aln
    • /usr/share/doc/t-coffee-examples/marna.tc_lib
    • /usr/share/doc/t-coffee-examples/new_profile1_pdb1.aln
    • /usr/share/doc/t-coffee-examples/newprf.aln
    • /usr/share/doc/t-coffee-examples/p120.aln
    • /usr/share/doc/t-coffee-examples/p250
    • /usr/share/doc/t-coffee-examples/p350.aln
    • /usr/share/doc/t-coffee-examples/prf1.aln
    • /usr/share/doc/t-coffee-examples/prf1.dnd
    • /usr/share/doc/t-coffee-examples/prf1.fasta
    • /usr/share/doc/t-coffee-examples/prf2.aln
    • /usr/share/doc/t-coffee-examples/prf2.dnd
    • /usr/share/doc/t-coffee-examples/prf2.fasta
    • /usr/share/doc/t-coffee-examples/prf3.aln
    • /usr/share/doc/t-coffee-examples/prf3.fasta
    • /usr/share/doc/t-coffee-examples/profile1_pdb1.aln
    • /usr/share/doc/t-coffee-examples/profile1_pdb1.fasta
    • /usr/share/doc/t-coffee-examples/profile1_pdb1_1.aln
    • /usr/share/doc/t-coffee-examples/profile2_pdb2.aln
    • /usr/share/doc/t-coffee-examples/profile2_pdb2.dnd
    • /usr/share/doc/t-coffee-examples/profile2_pdb2.fasta
    • /usr/share/doc/t-coffee-examples/sample1.score_ascii
    • /usr/share/doc/t-coffee-examples/sample_aln1.aln
    • /usr/share/doc/t-coffee-examples/sample_aln1.dnd
    • /usr/share/doc/t-coffee-examples/sample_aln1.fasta
    • /usr/share/doc/t-coffee-examples/sample_aln1.tc_lib
    • /usr/share/doc/t-coffee-examples/sample_aln1_1.aln
    • /usr/share/doc/t-coffee-examples/sample_aln1_2.aln
    • /usr/share/doc/t-coffee-examples/sample_aln2.aln
    • /usr/share/doc/t-coffee-examples/sample_aln2.fasta
    • /usr/share/doc/t-coffee-examples/sample_aln2.msf
    • /usr/share/doc/t-coffee-examples/sample_aln3.aln
    • /usr/share/doc/t-coffee-examples/sample_aln4.aln
    • /usr/share/doc/t-coffee-examples/sample_aln5.aln
    • /usr/share/doc/t-coffee-examples/sample_aln6.aln
    • /usr/share/doc/t-coffee-examples/sample_aln6.cache
    • /usr/share/doc/t-coffee-examples/sample_aln7.aln
    • /usr/share/doc/t-coffee-examples/sample_aln7.cache_aln
    • /usr/share/doc/t-coffee-examples/sample_dnaseq1.fasta
    • /usr/share/doc/t-coffee-examples/sample_lib1.mocca_lib
    • /usr/share/doc/t-coffee-examples/sample_lib1.tc_lib
    • /usr/share/doc/t-coffee-examples/sample_lib2.tc_lib
    • /usr/share/doc/t-coffee-examples/sample_lib3.tc_lib
    • /usr/share/doc/t-coffee-examples/sample_lib4.tc_lib02
    • /usr/share/doc/t-coffee-examples/sample_lib5.tc_lib
    • /usr/share/doc/t-coffee-examples/sample_list1.lib_list
    • /usr/share/doc/t-coffee-examples/sample_param_file.param
    • /usr/share/doc/t-coffee-examples/sample_profile1.aln
    • /usr/share/doc/t-coffee-examples/sample_profile2.aln
    • /usr/share/doc/t-coffee-examples/sample_rnaseq1.fasta
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.alifold
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.aln
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.cons.stk
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.cw.stk
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.cw_aln
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.dnd
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.fasta
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.stk
    • /usr/share/doc/t-coffee-examples/sample_rnaseq2.tcoffee.stk
    • /usr/share/doc/t-coffee-examples/sample_seq1.aln
    • /usr/share/doc/t-coffee-examples/sample_seq1.fasta
    • /usr/share/doc/t-coffee-examples/sample_seq1.score_ascii
    • /usr/share/doc/t-coffee-examples/sample_seq1.tc_lib
    • /usr/share/doc/t-coffee-examples/sample_seq2.fasta
    • /usr/share/doc/t-coffee-examples/sample_seq3.fasta
    • /usr/share/doc/t-coffee-examples/sample_seq4.fasta
    • /usr/share/doc/t-coffee-examples/sample_seq5.fasta
    • /usr/share/doc/t-coffee-examples/sample_seq6.fasta
    • /usr/share/doc/t-coffee-examples/sample_seq7.fasta
    • /usr/share/doc/t-coffee-examples/sample_seq8.seq
    • /usr/share/doc/t-coffee-examples/sample_tree.dnd
    • /usr/share/doc/t-coffee-examples/sample_tree2.dnd
    • /usr/share/doc/t-coffee-examples/sample_tree3.dnd
    • /usr/share/doc/t-coffee-examples/seq.fas
    • /usr/share/doc/t-coffee-examples/sproteases.small
    • /usr/share/doc/t-coffee-examples/sproteases.small.blosum62mt.sim_file
    • /usr/share/doc/t-coffee-examples/sproteases1_small.aln
    • /usr/share/doc/t-coffee-examples/sproteases1_small.dnd
    • /usr/share/doc/t-coffee-examples/sproteases1_small.fasta
    • /usr/share/doc/t-coffee-examples/sproteases2_small.aln
    • /usr/share/doc/t-coffee-examples/sproteases2_small.dnd
    • /usr/share/doc/t-coffee-examples/sproteases2_small.fasta
    • /usr/share/doc/t-coffee-examples/sproteases_chain.fasta
    • /usr/share/doc/t-coffee-examples/sproteases_large.aln
    • /usr/share/doc/t-coffee-examples/sproteases_large.code_name
    • /usr/share/doc/t-coffee-examples/sproteases_large.coded.fasta
    • /usr/share/doc/t-coffee-examples/sproteases_large.dnd
    • /usr/share/doc/t-coffee-examples/sproteases_large.fasta
    • /usr/share/doc/t-coffee-examples/sproteases_large.muscle
    • /usr/share/doc/t-coffee-examples/sproteases_large_muscle_trim.aln
    • /usr/share/doc/t-coffee-examples/sproteases_oneseq.fasta
    • /usr/share/doc/t-coffee-examples/sproteases_pair.fasta
    • /usr/share/doc/t-coffee-examples/sproteases_small.aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.b62_aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.cw_aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.dnd
    • /usr/share/doc/t-coffee-examples/sproteases_small.expresso
    • /usr/share/doc/t-coffee-examples/sproteases_small.fasta
    • /usr/share/doc/t-coffee-examples/sproteases_small.g0.aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.g0.cw_aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.g10.cw_aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.g10.score_ascii
    • /usr/share/doc/t-coffee-examples/sproteases_small.g15.cw_aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.mafft
    • /usr/share/doc/t-coffee-examples/sproteases_small.mcoffee
    • /usr/share/doc/t-coffee-examples/sproteases_small.muscle
    • /usr/share/doc/t-coffee-examples/sproteases_small.ph
    • /usr/share/doc/t-coffee-examples/sproteases_small.probcons
    • /usr/share/doc/t-coffee-examples/sproteases_small.score_ascii
    • /usr/share/doc/t-coffee-examples/sproteases_small.score_html
    • /usr/share/doc/t-coffee-examples/sproteases_small.tc_aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.tc_aln.aln
    • /usr/share/doc/t-coffee-examples/sproteases_small.template_file
    • /usr/share/doc/t-coffee-examples/sproteases_small_dna.fasta
    • /usr/share/doc/t-coffee-examples/struc1.pdb
    • /usr/share/doc/t-coffee-examples/struc2.pdb
    • /usr/share/doc/t-coffee-examples/struc3.pdb
    • /usr/share/doc/t-coffee-examples/struc4.pdb
    • /usr/share/doc/t-coffee-examples/struc5.pdb
    • /usr/share/doc/t-coffee-examples/struc6.pdb
    • /usr/share/doc/t-coffee-examples/struc7.pdb
    • /usr/share/doc/t-coffee-examples/struc8.pdb
    • /usr/share/doc/t-coffee-examples/sv.aln
    • /usr/share/doc/t-coffee-examples/sv.dnd
    • /usr/share/doc/t-coffee-examples/sv.fasta
    • /usr/share/doc/t-coffee-examples/sv.maln
    • /usr/share/doc/t-coffee-examples/template_file.template
    • /usr/share/doc/t-coffee-examples/template_file6.template
    • /usr/share/doc/t-coffee-examples/template_file7.template
    • /usr/share/doc/t-coffee-examples/test.lib
    • /usr/share/doc/t-coffee-examples/test.tc_lib
    • /usr/share/doc/t-coffee-examples/test_lib.tc_lib
    • /usr/share/doc/t-coffee-examples/three_cdna.fasta
    • /usr/share/doc/t-coffee-examples/three_pdb.aln
    • /usr/share/doc/t-coffee-examples/three_pdb.dnd
    • /usr/share/doc/t-coffee-examples/three_pdb.fasta
    • /usr/share/doc/t-coffee-examples/three_pdb_two_seq.aln
    • /usr/share/doc/t-coffee-examples/three_pdb_two_seq.dnd
    • /usr/share/doc/t-coffee-examples/three_pdb_two_seq.fasta
    • /usr/share/doc/t-coffee-examples/tlara_tRNA_aln10.output
    • /usr/share/doc/t-coffee-examples/tlara_tRNA_aln50.output
    • /usr/share/doc/t-coffee-examples/tlara_tRNA_aln51.output
    • /usr/share/doc/t-coffee-examples/two_profiles.template_file
    • /usr/share/doc/t-coffee-examples/x

    Changelog

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