snpomatic_0.0.20151015-1_i386.deb


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Description

snpomatic - fast, stringent short-read mapping software

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe i386
Package name: snpomatic
Package version: 0.0.20151015
Package release: 1
Package architecture: i386
Package type: deb
Installed size: 196 B
Download size: 79.35 KB
Official Mirror: archive.ubuntu.com
High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, stringent short-read mapping software. It supports a multitude of output types and formats, for uses in filtering reads, alignments, sequence-based genotyping calls, assisted reassembly of contigs etc.

Alternatives

    Download

    Source package: snpomatic

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install snpomatic deb package:
      # sudo apt-get install snpomatic

    Files

    • /usr/bin/findknownsnps
    • /usr/share/doc-base/snpomatic
    • /usr/share/doc-base/snpomatic-doc
    • /usr/share/doc/snpomatic/Manual.txt.gz
    • /usr/share/doc/snpomatic/changelog.Debian.gz
    • /usr/share/doc/snpomatic/copyright
    • /usr/share/man/man1/findknownsnps.1.gz

    Changelog

    2015-12-12 - Sascha Steinbiss <sascha@steinbiss.name> snpomatic (0.0.20151015-1) unstable; urgency=medium * Initial release. (Closes: #807779)

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