python-pymzml_0.7.6-dfsg-1_all.deb


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Description

python-pymzml - mzML mass spectrometric data parsing (Python 2.x)

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: python-pymzml
Package version: 0.7.6
Package release: dfsg-1
Package architecture: all
Package type: deb
Installed size: 64.21 KB
Download size: 278.90 KB
Official Mirror: archive.ubuntu.com
python-pymzml is an extension to Python that offers: - easy access to mass spectrometry (MS) data that allows the rapid development of tools; - a very fast parser for mzML data, the standard in mass spectrometry data format; - a set of functions to compare or handle spectra. This package contains python-pymzml for Python 2.

Alternatives

Conflicts

  • python-mzml

    Download

    Source package: python-pymzml

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install python-pymzml deb package:
      # sudo apt-get install python-pymzml

    Files

    • /usr/lib/python2.7/dist-packages/pymzml-0.7.6.egg-info
    • /usr/lib/python2.7/dist-packages/pymzml/__init__.py
    • /usr/lib/python2.7/dist-packages/pymzml/minimum.py
    • /usr/lib/python2.7/dist-packages/pymzml/obo.py
    • /usr/lib/python2.7/dist-packages/pymzml/plot.py
    • /usr/lib/python2.7/dist-packages/pymzml/run.py
    • /usr/lib/python2.7/dist-packages/pymzml/spec.py
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.0.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.1.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.10.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.11.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.12.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.12.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.12.2.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.13.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.13.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.13.2.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.14.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.15.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.16.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.17.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.17.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.18.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.18.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.18.2.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.2.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.2.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.3.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.3.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.4.0.obo
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    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.8.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.9.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.9.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-1.9.2.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.0.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.01.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.1.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.13.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.14.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.14.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.14.2.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.14.3.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.14.4.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.15.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.16.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.17.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.17.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.18.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.19.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.2.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.2.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.20.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.20.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.20.2.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.21.0.obo
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    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.26.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.27.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.28.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.29.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.3.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.3.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.30.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.31.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.32.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.33.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.33.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.34.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.35.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.36.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.37.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.38.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.39.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.4.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.40.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.5.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.50.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.51.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.6.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.6.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.7.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-2.9.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.01.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.01.2.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.02.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.03.1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.03.2.obo
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    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.03.4.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.03.5.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.10.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.11.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.12.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.13.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.14.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.15.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.16.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.17.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.18.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.19.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.20.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.21.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.22.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.23.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.24.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.25.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.27.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.28.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.29.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.30.0.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.31.0.obo
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    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.35.0.obo
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    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.76.0_rc1.obo
    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms-3.77.0.obo
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    • /usr/lib/python2.7/dist-packages/pymzml/obo/psi-ms.obo
    • /usr/share/doc/python-pymzml/README.md
    • /usr/share/doc/python-pymzml/changelog.Debian.gz
    • /usr/share/doc/python-pymzml/copyright
    • /usr/share/doc/python-pymzml/example_scripts/accessAllData.py
    • /usr/share/doc/python-pymzml/example_scripts/chromatogram.py
    • /usr/share/doc/python-pymzml/example_scripts/compareSpectra.py
    • /usr/share/doc/python-pymzml/example_scripts/deconvolution.py
    • /usr/share/doc/python-pymzml/example_scripts/download_obo_database.py
    • /usr/share/doc/python-pymzml/example_scripts/extractIonChromatogram.py
    • /usr/share/doc/python-pymzml/example_scripts/find_abundant_precursors.py
    • /usr/share/doc/python-pymzml/example_scripts/get_example_file.py
    • /usr/share/doc/python-pymzml/example_scripts/hasPeak.py
    • /usr/share/doc/python-pymzml/example_scripts/highestPeaks.py
    • /usr/share/doc/python-pymzml/example_scripts/parseAllExampleFiles.py
    • /usr/share/doc/python-pymzml/example_scripts/plotAspec.py
    • /usr/share/doc/python-pymzml/example_scripts/queryOBO.py
    • /usr/share/doc/python-pymzml/example_scripts/runTests.py
    • /usr/share/doc/python-pymzml/example_scripts/simpleParser.py
    • /usr/share/doc/python-pymzml/example_scripts/simpleParser_d.py
    • /usr/share/doc/python-pymzml/example_scripts/writeExample.py
    • /usr/share/lintian/overrides/python-pymzml
    • /usr/share/man/man7/python-pymzml.7.gz

    Changelog

    2015-11-26 - Filippo Rusconi <lopippo@debian.org> python-pymzml (0.7.6-dfsg-1) unstable; urgency=medium * New upstream version that introduces setup.py as a means of building and installing the software. * d/rules: change build system to include Python3. * New patch to remove the shebang line from all the class-defining Python files where it is not needed. * d/control: rename package names from python-mzml to python-pymzml to better stick to the general convention in the Debian archive.

    2014-08-20 - Filippo Rusconi <lopippo@debian.org> python-mzml (0.7.4-dfsg-3) unstable; urgency=medium * mv upstream upstream/metadata; * d/control: Canonicalize the VCS uris; * d/control: set Standards-Version: 3.9.5

    2013-01-02 - Filippo Rusconi <lopippo@debian.org> python-mzml (0.7.4-dfsg-2) unstable; urgency=low * python-mzml.install: change the usr/lib/python2.[67]/dist-packages install directories to the degenerate form usr/lib/python2.*/dist-packages/pymzml. The package will still build and install fine when 2.6 is removed. Thanks to Dmitry Shachnev <mitya57@gmail.com> for suggesting the fix. Closes: #697189.

    2012-10-09 - Filippo Rusconi <lopippo@debian.org> python-mzml (0.7.4-dfsg-1) unstable; urgency=low * Initial packaging of the pymzML software with COPYING file shipped for the first time within the source code tree after request to upstream. Closes: #690177.

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