python-pbh5tools_0.8.0+dfsg-4_amd64.deb


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Description

python-pbh5tools - tools for manipulating Pacific Biosciences HDF5 files -- Python 2 library

Property Value
Distribution Ubuntu 16.04 LTS (Xenial Xerus)
Repository Ubuntu Universe amd64
Package name python-pbh5tools
Package version 0.8.0+dfsg
Package release 4
Package architecture amd64
Package type deb
Installed size 135 B
Download size 28.07 KB
Official Mirror archive.ubuntu.com
This package provides functionality for manipulating and extracting data
from cmp.h5 and bas.h5 files produced by the Pacific Biosciences sequencers.
cmp.h5 files contain alignment information while bas.h5 files contain
base-call information.
pbh5tools is part of the SMRTAnalysis suite. This package provides the
Python 2 backend library

Alternatives

Package Version Architecture Repository
python-pbh5tools_0.8.0+dfsg-4_i386.deb 0.8.0+dfsg i386 Ubuntu Universe
python-pbh5tools - - -

Requires

Name Value
libc6 >= 2.3.4
python >= 2.7~
python << 2.8
python-h5py -
python-numpy -
python-pbcore -
python:any >= 2.7.5-5~

Download

Type URL
Binary Package python-pbh5tools_0.8.0+dfsg-4_amd64.deb
Source Package python-pbh5tools

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install python-pbh5tools deb package:
    # sudo apt-get install python-pbh5tools

Files

Path
/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Compare.py
/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Format.py
/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Merge.py
/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Select.py
/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Sort.py
/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Stats.py
/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Utils.py
/usr/lib/python2.7/dist-packages/pbh5tools/Indexer.py
/usr/lib/python2.7/dist-packages/pbh5tools/Metrics.py
/usr/lib/python2.7/dist-packages/pbh5tools/PBH5ToolsException.py
/usr/lib/python2.7/dist-packages/pbh5tools/__init__.py
/usr/lib/python2.7/dist-packages/pbh5tools/_version.py
/usr/lib/python2.7/dist-packages/pbh5tools/cbook.py
/usr/lib/python2.7/dist-packages/pbh5tools/ci.x86_64-linux-gnu.so
/usr/lib/python2.7/dist-packages/pbh5tools/mlab.py
/usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/PKG-INFO
/usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/dependency_links.txt
/usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/not-zip-safe
/usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/requires.txt
/usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/top_level.txt
/usr/share/doc/python-pbh5tools/NEWS.Debian.gz
/usr/share/doc/python-pbh5tools/changelog.Debian.gz
/usr/share/doc/python-pbh5tools/copyright
/usr/share/doc/python-pbh5tools/examples/examples.md.gz

Changelog

2016-02-14 - Afif Elghraoui <afif@ghraoui.name>
python-pbh5tools (0.8.0+dfsg-4) unstable; urgency=medium
* Split command-line executables into a separate binary package
* Fix broken unit test (Closes: #814210)
2015-11-28 - Afif Elghraoui <afif@ghraoui.name>
python-pbh5tools (0.8.0+dfsg-3) unstable; urgency=low
* Don't install LICENSES.txt file
* Ignore cram test results because of spurious failures
2015-11-15 - Afif Elghraoui <afif@ghraoui.name>
python-pbh5tools (0.8.0+dfsg-2) unstable; urgency=medium
* Make package short descriptions unique
* Add manpage symlinks for scripts with language extensions.
* Enable cram tests at build time.
* Remove unnecessary build-dependency on pandoc.
* Include examples.
2015-08-15 - Afif Elghraoui <afif@ghraoui.name>
python-pbh5tools (0.8.0+dfsg-1) unstable; urgency=low
* Initial release (Closes: #787982)
* Added manpages for executable scripts
* Set sphinx documentation theme to default from original PacBio theme
* Made symlinks from upstream executable name to version without .py suffix

See Also

Package Description
python-pbkdf2_1.3+20110613.git2a0fb15~ds0-3_all.deb Python RSA PKCS#5 v2.0 module (Python 2)
python-pcapy_0.10.8-1build1_amd64.deb Python interface to the libpcap packet capture library
python-pcl-msgs_0.2.0-2_all.deb Python code for PCL-related Robot OS Messages
python-pcp_3.10.8build1_amd64.deb Performance Co-Pilot Python PMAPI module
python-pcs_0.6+debian-0ubuntu3_amd64.deb Packet Construction Set for Python
python-pdfminer_20140328+dfsg-1_all.deb PDF parser and analyser
python-pdfrw-doc_0.2-2_all.deb PDF file manipulation library (documentation)
python-pdfrw_0.2-2_all.deb PDF file manipulation library (Python 2)
python-pdftools_0.37-4_all.deb PDF document reading classes
python-peak.rules_0.5a1+r2713-1_all.deb generic functions support for Python
python-peak.util.decorators_1.8-3_all.deb version-agnostic decorators support for Python
python-peak.util_20160204-1_all.deb utilities from the Python Enterprise Application Kit
python-pebl-doc_1.0.2-3_all.deb Python Environment for Bayesian Learning - documentation
python-pebl_1.0.2-3_amd64.deb Python Environment for Bayesian Learning
python-pefile_1.2.10.139-2_all.deb Portable Executable (PE) parsing module for Python
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