python-pbh5tools_0.8.0+dfsg-4_amd64.deb


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Description

python-pbh5tools - tools for manipulating Pacific Biosciences HDF5 files -- Python 2 library

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: python-pbh5tools
Package version: 0.8.0+dfsg
Package release: 4
Package architecture: amd64
Package type: deb
Installed size: 135 B
Download size: 28.07 KB
Official Mirror: archive.ubuntu.com
This package provides functionality for manipulating and extracting data from cmp.h5 and bas.h5 files produced by the Pacific Biosciences sequencers. cmp.h5 files contain alignment information while bas.h5 files contain base-call information. pbh5tools is part of the SMRTAnalysis suite. This package provides the Python 2 backend library

Alternatives

    Download

    Source package: python-pbh5tools

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install python-pbh5tools deb package:
      # sudo apt-get install python-pbh5tools

    Files

    • /usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Compare.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Format.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Merge.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Select.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Sort.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Stats.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Utils.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/Indexer.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/Metrics.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/PBH5ToolsException.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/__init__.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/_version.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/cbook.py
    • /usr/lib/python2.7/dist-packages/pbh5tools/ci.x86_64-linux-gnu.so
    • /usr/lib/python2.7/dist-packages/pbh5tools/mlab.py
    • /usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/PKG-INFO
    • /usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/dependency_links.txt
    • /usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/not-zip-safe
    • /usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/requires.txt
    • /usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/top_level.txt
    • /usr/share/doc/python-pbh5tools/NEWS.Debian.gz
    • /usr/share/doc/python-pbh5tools/changelog.Debian.gz
    • /usr/share/doc/python-pbh5tools/copyright
    • /usr/share/doc/python-pbh5tools/examples/examples.md.gz

    Changelog

    2016-02-14 - Afif Elghraoui <afif@ghraoui.name> python-pbh5tools (0.8.0+dfsg-4) unstable; urgency=medium * Split command-line executables into a separate binary package * Fix broken unit test (Closes: #814210)

    2015-11-28 - Afif Elghraoui <afif@ghraoui.name> python-pbh5tools (0.8.0+dfsg-3) unstable; urgency=low * Don't install LICENSES.txt file * Ignore cram test results because of spurious failures

    2015-11-15 - Afif Elghraoui <afif@ghraoui.name> python-pbh5tools (0.8.0+dfsg-2) unstable; urgency=medium * Make package short descriptions unique * Add manpage symlinks for scripts with language extensions. * Enable cram tests at build time. * Remove unnecessary build-dependency on pandoc. * Include examples.

    2015-08-15 - Afif Elghraoui <afif@ghraoui.name> python-pbh5tools (0.8.0+dfsg-1) unstable; urgency=low * Initial release (Closes: #787982) * Added manpages for executable scripts * Set sphinx documentation theme to default from original PacBio theme * Made symlinks from upstream executable name to version without .py suffix

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