python-indigo - Organic Chemistry Toolkit (Python module)

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: python-indigo
Package version: 1.1.12
Package release: 1.1
Package architecture: all
Package type: deb
Installed size: 151 B
Download size: 22.32 KB
Official Mirror:
Indigo is a C++ based organic chemistry and cheminformatics software environment. Features Include: * Molecule and reaction rendering including SVG support * Automatic layout for SMILES-represented molecules and reactions * Canonical (isomeric) SMILES computation * Exact matching, substructure matching, SMARTS matching * Matching of tautomers and resonance structures * Molecule fingerprinting, molecule similarity computation * Fast enumeration of SSSR rings, subtrees, and edge sugraphs * Molecular weight, molecular formula computation * R-Group deconvolution and scaffold detection * Computation of the exact maximum common substructure for an arbitrary amount of input structures * Combinatorial chemistry * Plugin support in the API File formats Indigo support include MDL Mol, SDF, RDF, CML, SMILES and SMARTS. This package contains the Python modules.



    Source package: indigo

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install python-indigo deb package:
      # sudo apt-get install python-indigo


    • /usr/lib/python2.7/dist-packages/
    • /usr/lib/python2.7/dist-packages/
    • /usr/share/doc/python-indigo/changelog.Debian.gz
    • /usr/share/doc/python-indigo/copyright


    2016-01-22 - Gianfranco Costamagna <> indigo (1.1.12-1.1) unstable; urgency=medium * Non-maintainer upload. * Change libpng12-dev build-dependency to libpng-dev, to ease libpng transition. (Closes: #810172)

    2014-02-11 - Debichem Team <> indigo (1.1.12-1) unstable; urgency=low * New upstream release. [ Daniel Leidert ] * debian/control (Standards-Version): Bumped to 3.9.5. (Recommends): indigo-utils recommends libindigo-java because chemdiff needs it. * debian/chemdiff.1, debian/indigo-cano.1, debian/indigo-deco.1, debian/indigo-depict.1, debian/indigo-utils.manpages: Added. * debian/patches/718689_gcc_architecture_flags.patch: Dropped. - Applied upstream. * debian/patches/series: Adjusted.

    2013-08-04 - Debichem Team <> indigo (1.1.11-2) unstable; urgency=low [ Daniel Leidert ] * debian/javabuild, debian/libindigo-java.jlibs, debian/rules: Removed upstream version from jars - handled by javahelper itself. * debian/patches/718689_gcc_architecture_flags.patch: Added. - Only apply GCC flags -m32/-m64 to architectures which support them and don't include the GCC hack on kfreebsd-amd64 (closes: #718689). * debian/patches/series: Adjusted.

    2013-08-03 - Debichem Team <> indigo (1.1.11-1) unstable; urgency=low * New upstream release. - Uses Hill convention for GrossFormula function (closes: #690275). [ Daniel Leidert ] * debian/control (Standards-Version): Bumped to 3.9.4. (Build-Depends): Added python (closes: #713767). Added autotools-dev, libfreetype6-dev and libpng12-dev. (Vcs-Browser, Vcs-Svn): Fixed vcs-field-not-canonical. (Section): Fixed duplication of sections. (Depends): Fixed weak-library-dev-dependency. Hardened dependency of python-indigo and libindigo-java to libindigo0d. (Description): Fixed typos. * debian/libindigo0d.dirs, debian/libindigo-dev.dirs: Dropped. * debian/libindigo0d.install: Added libraries. * debian/libindigo-dev.install: Added libraries. * debian/libindigo0d.lintian-overrides: Added to override package-name-doesnt-match-sonames. * debian/rules: Enabled hardening. Added autotools_dev addon. (override_dh_auto_configure): Added -DCMAKE_BUILD_TYPE and -DCMAKE_SKIP_RPATH to avoid setting RPATHs. Define missing library paths for system libraries. (override_dh_auto_install): Moved library installation to dh_install. (override_dh_makeshlibs): Dropped version. Better use -V only. * debian/README.source: Updated. * debian/patches/library_dir_and_name.patch: Updated. - Set the libraries SOVERSION to "0d" to fix inter-library linkages. Fixed some includes.

    2012-05-04 - Michael Banck <> indigo (1.1.5-1) UNRELEASED; urgency=low * New upstream release. [ Michael Banck ] * debian/control (indigo-utils/Description): Add a one-line summary for every tool explaining its purpose. * debian/control (Build-Depends): Added cmake. * debian/rules: Overhauled for cmake and directory rearrangements. * debian/rules (CLASSPATH): Updated version numbers. * debian/libindigo-java.jlibs: Likewise. * debian/javabuild: Likewise. * debian/patches/makefile.patch: Removed, no longer needed. * debian/patches/java_wrappers.patch: Updated. * debian/patches/library_dir_and_name.patch: Likewise. * debian/indigo-utils.install: Updated for new cmake build directory. * debian/libindigo-dev.install: Likewise. * debian/libindigo-dev.dirs: New file. * debian/rules (override_dh_makeshlibs): New rule, set libindigo0d shlibs versioning information to ">= 1.1". * debian/control (python-indigo/Depends): Bump libindigo0d version to 1.1. * debian/control (libindigo-java/Depends): Likewise. [ Daniel Leidert ] * debian/watch: Added.

    2012-05-04 - Michael Banck <> indigo (1.0.0-2) unstable; urgency=low * debian/rules: Add python2 to dh modules (Closes: #671057).