python-htseq_0.5.4p3-2_amd64.deb


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Description

python-htseq - high-throughput genome sequencing read analysis utilities

Property Value
Distribution Ubuntu 16.04 LTS (Xenial Xerus)
Repository Ubuntu Universe amd64
Package name python-htseq
Package version 0.5.4p3
Package release 2
Package architecture amd64
Package type deb
Installed size 660 B
Download size 199.18 KB
Official Mirror archive.ubuntu.com
HTSeq can be used to performing a number of common analysis tasks
when working with high-throughput genome sequencing reads:
* Getting statistical summaries about the base-call quality scores to
study the data quality.
* Calculating a coverage vector and exporting it for visualization in
a genome browser.
* Reading in annotation data from a GFF file.
* Assigning aligned reads from an RNA-Seq experiments to exons and
genes.

Alternatives

Package Version Architecture Repository
python-htseq_0.5.4p3-2_i386.deb 0.5.4p3 i386 Ubuntu Universe
python-htseq - - -

Requires

Name Value
libc6 >= 2.14
libgcc1 >= 1:4.1.1
libstdc++6 >= 4.1.1
python << 2.8
python >= 2.7
python:any >= 2.7.1-0ubuntu2

Download

Type URL
Binary Package python-htseq_0.5.4p3-2_amd64.deb
Source Package htseq

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install python-htseq deb package:
    # sudo apt-get install python-htseq

Files

Path
/usr/bin/htseq-count
/usr/bin/htseq-qa
/usr/lib/pyshared/python2.7/HTSeq/_HTSeq.so
/usr/lib/pyshared/python2.7/HTSeq/_StepVector.so
/usr/lib/python2.7/dist-packages/HTSeq/StepVector.py
/usr/lib/python2.7/dist-packages/HTSeq/_HTSeq.so
/usr/lib/python2.7/dist-packages/HTSeq/_HTSeq_internal.py
/usr/lib/python2.7/dist-packages/HTSeq/_StepVector.so
/usr/lib/python2.7/dist-packages/HTSeq/__init__.py
/usr/lib/python2.7/dist-packages/HTSeq/_version.py
/usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/PKG-INFO
/usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/SOURCES.txt
/usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/dependency_links.txt
/usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/top_level.txt
/usr/lib/python2.7/dist-packages/HTSeq/scripts/__init__.py
/usr/lib/python2.7/dist-packages/HTSeq/scripts/count.py
/usr/lib/python2.7/dist-packages/HTSeq/scripts/qa.py
/usr/share/doc/python-htseq/changelog.Debian.gz
/usr/share/doc/python-htseq/copyright
/usr/share/doc/python-htseq/history.rst.gz
/usr/share/man/man1/htseq-count.1.gz
/usr/share/man/man1/htseq-qa.1.gz
/usr/share/pyshared/HTSeq/StepVector.py
/usr/share/pyshared/HTSeq/_HTSeq_internal.py
/usr/share/pyshared/HTSeq/__init__.py
/usr/share/pyshared/HTSeq/_version.py
/usr/share/pyshared/HTSeq-0.5.4p3.egg-info/PKG-INFO
/usr/share/pyshared/HTSeq-0.5.4p3.egg-info/SOURCES.txt
/usr/share/pyshared/HTSeq-0.5.4p3.egg-info/dependency_links.txt
/usr/share/pyshared/HTSeq-0.5.4p3.egg-info/top_level.txt
/usr/share/pyshared/HTSeq/scripts/__init__.py
/usr/share/pyshared/HTSeq/scripts/count.py
/usr/share/pyshared/HTSeq/scripts/qa.py

Changelog

2013-09-05 - Diane Trout <diane@ghic.org>
htseq (0.5.4p3-2) unstable; urgency=low
[ Andreas Tille ]
* debian/control:
- add myself to Uploaders
- cme fix dpkg-control
[ Diane Trout ]
* build man pages in binary target and html pages in independent.
* disable dh_sphinxinstall for binary build.
Closes: #721780
2013-07-12 - Diane Trout <diane@ghic.org>
htseq (0.5.4p3-1) unstable; urgency=low
* Initial packaging (Closes: #718664)

See Also

Package Description
python-http-parser_0.8.3-2build2_amd64.deb http request/response parser
python-httpbin_0.4.0+dfsg-1_all.deb HTTP request and response service
python-httpretty_0.8.6-2_all.deb HTTP client mock - Python 2.x
python-humanize_0.5.1-2_all.deb Python Humanize library (Python 2)
python-hunspell_0.1-2build3_amd64.deb Python 2 binding for Hunspell
python-hurry.filesize_0.9-1_all.deb human readable file sizes or anything sized in bytes - Python 2.x
python-hurry.query_1.1.1-0ubuntu2_all.deb Higher level query system for the zope.catalog
python-hy_0.11.1-1_all.deb Lisp (s-expression) based frontend to Python
python-hyphy_2.2.6+dfsg-3build3_amd64.deb Hypothesis testing using Phylogenies (Python 2 module)
python-hypothesis_3.0.1-1_all.deb advanced Quickcheck style testing library for Python 2
python-iapws_1.1.1-2_all.deb Python implementation of the international APWS-IF97 steam tables
python-ibm-db-sa_2.0.5-0ubuntu2_all.deb SQLAlchemy support for IBM Data Servers - Python 2.x
python-icalendar-doc_3.8-1_all.deb parser/generator of iCalendar files for use with Python -- docs
python-icalendar_3.8-1_all.deb parser/generator of iCalendar files for use with Python2
python-id3_1.2-6.3_all.deb Python module for id3-tags manipulation
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