python-htseq_0.5.4p3-2_amd64.deb


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Description

python-htseq - high-throughput genome sequencing read analysis utilities

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: python-htseq
Package version: 0.5.4p3
Package release: 2
Package architecture: amd64
Package type: deb
Installed size: 660 B
Download size: 199.18 KB
Official Mirror: archive.ubuntu.com
HTSeq can be used to performing a number of common analysis tasks when working with high-throughput genome sequencing reads: * Getting statistical summaries about the base-call quality scores to study the data quality. * Calculating a coverage vector and exporting it for visualization in a genome browser. * Reading in annotation data from a GFF file. * Assigning aligned reads from an RNA-Seq experiments to exons and genes.

Alternatives

    Download

    Source package: htseq

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install python-htseq deb package:
      # sudo apt-get install python-htseq

    Files

    • /usr/bin/htseq-count
    • /usr/bin/htseq-qa
    • /usr/lib/pyshared/python2.7/HTSeq/_HTSeq.so
    • /usr/lib/pyshared/python2.7/HTSeq/_StepVector.so
    • /usr/lib/python2.7/dist-packages/HTSeq/StepVector.py
    • /usr/lib/python2.7/dist-packages/HTSeq/_HTSeq.so
    • /usr/lib/python2.7/dist-packages/HTSeq/_HTSeq_internal.py
    • /usr/lib/python2.7/dist-packages/HTSeq/_StepVector.so
    • /usr/lib/python2.7/dist-packages/HTSeq/__init__.py
    • /usr/lib/python2.7/dist-packages/HTSeq/_version.py
    • /usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/PKG-INFO
    • /usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/SOURCES.txt
    • /usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/dependency_links.txt
    • /usr/lib/python2.7/dist-packages/HTSeq-0.5.4p3.egg-info/top_level.txt
    • /usr/lib/python2.7/dist-packages/HTSeq/scripts/__init__.py
    • /usr/lib/python2.7/dist-packages/HTSeq/scripts/count.py
    • /usr/lib/python2.7/dist-packages/HTSeq/scripts/qa.py
    • /usr/share/doc/python-htseq/changelog.Debian.gz
    • /usr/share/doc/python-htseq/copyright
    • /usr/share/doc/python-htseq/history.rst.gz
    • /usr/share/man/man1/htseq-count.1.gz
    • /usr/share/man/man1/htseq-qa.1.gz
    • /usr/share/pyshared/HTSeq/StepVector.py
    • /usr/share/pyshared/HTSeq/_HTSeq_internal.py
    • /usr/share/pyshared/HTSeq/__init__.py
    • /usr/share/pyshared/HTSeq/_version.py
    • /usr/share/pyshared/HTSeq-0.5.4p3.egg-info/PKG-INFO
    • /usr/share/pyshared/HTSeq-0.5.4p3.egg-info/SOURCES.txt
    • /usr/share/pyshared/HTSeq-0.5.4p3.egg-info/dependency_links.txt
    • /usr/share/pyshared/HTSeq-0.5.4p3.egg-info/top_level.txt
    • /usr/share/pyshared/HTSeq/scripts/__init__.py
    • /usr/share/pyshared/HTSeq/scripts/count.py
    • /usr/share/pyshared/HTSeq/scripts/qa.py

    Changelog

    2013-09-05 - Diane Trout <diane@ghic.org> htseq (0.5.4p3-2) unstable; urgency=low [ Andreas Tille ] * debian/control: - add myself to Uploaders - cme fix dpkg-control [ Diane Trout ] * build man pages in binary target and html pages in independent. * disable dh_sphinxinstall for binary build. Closes: #721780

    2013-07-12 - Diane Trout <diane@ghic.org> htseq (0.5.4p3-1) unstable; urgency=low * Initial packaging (Closes: #718664)

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