python-cutadapt_1.9.1-1build1_amd64.deb


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Description

python-cutadapt - Clean biological sequences from high-throughput sequencing reads

Property Value
Distribution Ubuntu 16.04 LTS (Xenial Xerus)
Repository Ubuntu Universe amd64
Package name python-cutadapt
Package version 1.9.1
Package release 1build1
Package architecture amd64
Package type deb
Installed size 373 B
Download size 99.87 KB
Official Mirror archive.ubuntu.com
Cutadapt helps with biological sequence clean tasks by finding the adapter
or primer sequences in an error-tolerant way.
It can also modify and filter reads in various ways.
Adapter sequences can contain IUPAC wildcard characters.
Also, paired-end reads and even colorspace data is supported.
If you want, you can also just demultiplex your input data, without removing
adapter sequences at all.

Alternatives

Package Version Architecture Repository
python-cutadapt_1.9.1-1build1_i386.deb 1.9.1 i386 Ubuntu Universe
python-cutadapt - - -

Requires

Name Value
libc6 >= 2.4
python << 2.8
python >= 2.7~
python:any >= 2.7.5-5~

Download

Type URL
Binary Package python-cutadapt_1.9.1-1build1_amd64.deb
Source Package python-cutadapt

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install python-cutadapt deb package:
    # sudo apt-get install python-cutadapt

Files

Path
/usr/bin/cutadapt
/usr/lib/python2.7/dist-packages/cutadapt-1.9.1.egg-info
/usr/lib/python2.7/dist-packages/cutadapt/__init__.py
/usr/lib/python2.7/dist-packages/cutadapt/__main__.py
/usr/lib/python2.7/dist-packages/cutadapt/_align.x86_64-linux-gnu.so
/usr/lib/python2.7/dist-packages/cutadapt/_qualtrim.x86_64-linux-gnu.so
/usr/lib/python2.7/dist-packages/cutadapt/_seqio.x86_64-linux-gnu.so
/usr/lib/python2.7/dist-packages/cutadapt/adapters.py
/usr/lib/python2.7/dist-packages/cutadapt/align.py
/usr/lib/python2.7/dist-packages/cutadapt/colorspace.py
/usr/lib/python2.7/dist-packages/cutadapt/compat.py
/usr/lib/python2.7/dist-packages/cutadapt/filters.py
/usr/lib/python2.7/dist-packages/cutadapt/modifiers.py
/usr/lib/python2.7/dist-packages/cutadapt/qualtrim.py
/usr/lib/python2.7/dist-packages/cutadapt/report.py
/usr/lib/python2.7/dist-packages/cutadapt/seqio.py
/usr/lib/python2.7/dist-packages/cutadapt/xopen.py
/usr/lib/python2.7/dist-packages/cutadapt/scripts/__init__.py
/usr/lib/python2.7/dist-packages/cutadapt/scripts/cutadapt.py
/usr/share/doc/python-cutadapt/README.Debian
/usr/share/doc/python-cutadapt/changelog.Debian.gz
/usr/share/doc/python-cutadapt/copyright
/usr/share/man/man1/cutadapt.1.gz

Changelog

2016-01-19 - Matthias Klose <doko@ubuntu.com>
python-cutadapt (1.9.1-1build1) xenial; urgency=medium
* No-change rebuild to drop python3.4 support.
2015-12-10 - Olivier Sallou <osallou@debian.org>
python-cutadapt (1.9.1-1) unstable; urgency=medium
* New upstream release 
2015-08-17 - Olivier Sallou <osallou@debian.org>
python-cutadapt (1.8.3-1) unstable; urgency=low
* Initial release (Closes: #795822)

See Also

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python-dballe_7.7-1_amd64.deb DB-ALL.e Python library for weather research
python-dbf-doc_0.96.005-1_all.deb Python module for reading and writing dbf files (common documentation)
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