python-cobra-data_0.4.0b6-1build1_all.deb


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Description

python-cobra-data - constraint-based modeling of biological networks (data)

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: python-cobra-data
Package version: 0.4.0b6
Package release: 1build1
Package architecture: all
Package type: deb
Installed size: 9.28 KB
Download size: 735.83 KB
Official Mirror: archive.ubuntu.com
COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely used for genome-scale modeling of metabolic networks in both prokaryotes and eukaryotes. COBRApy is a constraint-based modeling package that is designed to accommodate the biological complexity of the next generation of COBRA models and provides access to commonly used COBRA methods, such as flux balance analysis, flux variability analysis, and gene deletion analyses. This package provides required and sample data files.

Alternatives

    Download

    Source package: python-cobra

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install python-cobra-data deb package:
      # sudo apt-get install python-cobra-data

    Files

    • /usr/share/doc/python-cobra-data/changelog.Debian.gz
    • /usr/share/doc/python-cobra-data/copyright
    • /usr/share/lintian/overrides/python-cobra-data
    • /usr/share/python-cobra/data/iJO1366.pickle
    • /usr/share/python-cobra/data/iJO1366.xml
    • /usr/share/python-cobra/data/invalid0.xml
    • /usr/share/python-cobra/data/invalid1.xml
    • /usr/share/python-cobra/data/invalid2.xml
    • /usr/share/python-cobra/data/mini.json
    • /usr/share/python-cobra/data/mini.mat
    • /usr/share/python-cobra/data/mini.pickle
    • /usr/share/python-cobra/data/mini_cobra.xml
    • /usr/share/python-cobra/data/mini_fbc1.xml
    • /usr/share/python-cobra/data/mini_fbc2.xml
    • /usr/share/python-cobra/data/mini_fbc2.xml.bz2
    • /usr/share/python-cobra/data/mini_fbc2.xml.gz
    • /usr/share/python-cobra/data/salmonella.genes
    • /usr/share/python-cobra/data/salmonella.media
    • /usr/share/python-cobra/data/salmonella.pickle
    • /usr/share/python-cobra/data/salmonella.xml
    • /usr/share/python-cobra/data/textbook.xml.gz
    • /usr/share/python-cobra/data/textbook_fva.json

    Changelog

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