pycorrfit_0.9.5+dfsg-1_amd64.deb


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Description

pycorrfit - tool for fitting correlation curves on a logarithmic plot

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: pycorrfit
Package version: 0.9.5+dfsg
Package release: 1
Package architecture: amd64
Package type: deb
Installed size: 1.82 KB
Download size: 785.05 KB
Official Mirror: archive.ubuntu.com
PyCorrFit is a general-purpose FCS evaluation software that, amongst other formats, supports the established Zeiss ConfoCor3 ~.fcs file format. PyCorrFit comes with several built-in model functions, covering a wide range of applications in standard confocal FCS. In addition, it contains equations dealing with different excitation geometries like total internal reflection (TIR).

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    Download

    Source package: pycorrfit

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install pycorrfit deb package:
      # sudo apt-get install pycorrfit

    Files

    • /usr/bin/pycorrfit
    • /usr/lib/python2.7/dist-packages/pycorrfit/PyCorrFit.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/__init__.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/__main__.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/doc.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/edclasses.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/fcs_data_set.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/frontend.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/icon.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/main.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/misc.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/openfile.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/page.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/plotting.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/usermodel.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/wxutils.py
    • /usr/lib/python2.7/dist-packages/pycorrfit-0.9.5.egg-info/PKG-INFO
    • /usr/lib/python2.7/dist-packages/pycorrfit-0.9.5.egg-info/dependency_links.txt
    • /usr/lib/python2.7/dist-packages/pycorrfit-0.9.5.egg-info/entry_points.txt
    • /usr/lib/python2.7/dist-packages/pycorrfit-0.9.5.egg-info/requires.txt
    • /usr/lib/python2.7/dist-packages/pycorrfit-0.9.5.egg-info/top_level.txt
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_1C.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_2D2D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_3D2D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_3D2Dkin_Ries.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_3D3D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_gaussian_1C.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_gaussian_3D2D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_TIRF_gaussian_3D3D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_classic_gaussian_2D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_classic_gaussian_3D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_classic_gaussian_3D2D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/MODEL_classic_gaussian_TT3D3D.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/models/__init__.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/__init__.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_ASC_ALV.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_CSV_PyCorrFit.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_FCS_Confocor3.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_SIN_correlator_com.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_mat_ries.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_PicoQuant.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/util.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/__init__.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/__version__.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/correlation_methods.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/correlation_objects.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/fib4.pyx
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/fib4.x86_64-linux-gnu.so
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/fitting_methods.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/readfiles/read_pt3_scripts/import_methods.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/__init__.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/average.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/background.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/batchcontrol.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/chooseimport.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/comment.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/datarange.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/example.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/globalfit.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/info.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/overlaycurves.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/parmrange.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/plotexport.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/simulation.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/statistics.py
    • /usr/lib/python2.7/dist-packages/pycorrfit/tools/trace.py
    • /usr/lib/python2.7/dist-packages/pycorrfit_doc/ChangeLog.txt
    • /usr/lib/python2.7/dist-packages/pycorrfit_doc/PyCorrFit_doc.pdf
    • /usr/share/applications/pycorrfit.desktop
    • /usr/share/doc/pycorrfit/README.Debian
    • /usr/share/doc/pycorrfit/changelog.Debian.gz
    • /usr/share/doc/pycorrfit/copyright
    • /usr/share/doc/pycorrfit/examples/external_model_functions/ExampleFunc_CS_2D+2D+S+T.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/ExampleFunc_CS_3D+S+T.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/ExampleFunc_Exp_correlated_noise.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/ExampleFunc_SFCS_1C_2D_Autocorrelation.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/ExampleFunc_SFCS_1C_2D_Cross-correlation.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/ExampleFunc_TIRF_zOnly.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/Model_AC_3D+T_confocal.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/Model_Flow_AC_3D_confocal.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/Model_Flow_CC_Backward_3D_confocal.txt
    • /usr/share/doc/pycorrfit/examples/external_model_functions/Model_Flow_CC_Forward_3D_confocal.txt
    • /usr/share/doc/pycorrfit/examples/sample_sessions/CSFCS_DiO-in-DOPC.pcfs
    • /usr/share/doc/pycorrfit/examples/sample_sessions/CSFCS_DiO-in-DOPC.pcfs.REMOVED.git-id
    • /usr/share/doc/pycorrfit/examples/sample_sessions/ConfocalFCS_Alexa488_xcorr.pcfs
    • /usr/share/man/man1/pycorrfit.1.gz
    • /usr/share/pixmaps/pycorrfit.xpm

    Changelog

    2016-01-06 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.9.5+dfsg-1) unstable; urgency=medium * Imported Upstream version 0.9.5+dfsg

    2015-12-14 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.9.4+dfsg-1) unstable; urgency=medium * Imported Upstream version 0.9.4+dfsg

    2015-12-03 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.9.3+dfsg-1) unstable; urgency=medium * Imported Upstream version 0.9.3+dfsg

    2015-11-06 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.9.2+dfsg-1) unstable; urgency=medium * Imported Upstream version 0.9.2+dfsg * debian/copyright: add fitting_methods.py to copyright stanza

    2015-10-26 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.9.1+dfsg-1) unstable; urgency=medium * Imported Upstream version 0.9.1+dfsg * d/pycorrfit.menu: deleted because the .desktop file is present

    2015-05-29 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.8.8+dfsg-1) unstable; urgency=medium * d/control: add new Build-Dependencies, set Architecture to any * d/rules: new doc dir, avoid pdf download during clean, new get-orig-source target, remove duplicated LICENSE file * d/watch: add +dfsg suffix * d/copyright: add Files-Excluded section * d/patches: deleted * d/get-orig-source: deleted * d/pycorrfit.pyremove: remove, as we need the egg-info directory * d/source/options: ignore generated files * Imported Upstream version 0.8.8+dfsg

    2014-08-25 - Andreas Tille <tille@debian.org> pycorrfit (0.8.3-2) unstable; urgency=medium [ Andreas Tille ] * debhelper 9 * cme fix dpkg-control * Use wxpy30-update to create a patch that enables wxpython3.0 Closes: #759070 [ Alexandre Mestiashvili ] * d/patches/fix_python_path.patch: adjust path to module location

    2014-04-15 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.8.3-1) unstable; urgency=medium * Imported Upstream version 0.8.3 * d/rules: do not compress example sessions and external model functions force 644 permissions for the files in the examples dir * d/control: move python-sympy to Recommends:

    2014-03-25 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.8.2-2) unstable; urgency=medium * d/control: Recommneds: add texlive-latex-base, i remove ghostscript - dep of dvipng, remove texlive-science * d/rules: add one more pass of pdflatex for the tex source * d/pycorrfit.install: copy sample_session to examples

    2014-02-18 - Alexandre Mestiashvili <alex@biotec.tu-dresden.de> pycorrfit (0.8.2-1) unstable; urgency=medium * Imported Upstream version 0.8.2 * d/control: add texlive-bibtex-extra to Build-Depends: removed: texlive-latex-base, as it is installed as dependency anyway added python-wxgtk2.8 to Depends: moved optional latex dependencies to Recommended: * d/rules: more specific rules for the tex source

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