proftmb_1.1.12-3_amd64.deb


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Description

proftmb - per-residue prediction of bacterial transmembrane beta barrels

Property Value
Distribution Ubuntu 16.04 LTS (Xenial Xerus)
Repository Ubuntu Universe amd64
Package name proftmb
Package version 1.1.12
Package release 3
Package architecture amd64
Package type deb
Installed size 849 B
Download size 388.23 KB
Official Mirror archive.ubuntu.com
proftmb predicts transmembrane beta-barrel (TMB) proteins in Gram-negative
bacteria.
For each query protein, proftmb provides both a Z-value indicating that the
protein actually contains a membrane barrel, and a four-state per-residue
labeling of upward- and downward-facing strands, periplasmic hairpins and
extracellular loops.

Alternatives

Package Version Architecture Repository
proftmb_1.1.12-3_i386.deb 1.1.12 i386 Ubuntu Universe
proftmb - - -

Requires

Name Value
libc6 >= 2.14
libgcc1 >= 1:3.0
libgsl2 -
libstdc++6 >= 5.2

Download

Type URL
Binary Package proftmb_1.1.12-3_amd64.deb
Source Package proftmb

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install proftmb deb package:
    # sudo apt-get install proftmb

Files

Path
/usr/bin/proftmb
/usr/share/doc/proftmb/README
/usr/share/doc/proftmb/changelog.Debian.gz
/usr/share/doc/proftmb/copyright
/usr/share/doc/proftmb/examples/16761001.Q
/usr/share/doc/proftmb/examples/1a0s_P.f.1.Q.gz
/usr/share/doc/proftmb/examples/1af6_A.f.2.Q.gz
/usr/share/doc/proftmb/examples/1bt9_A.f.3.Q.gz
/usr/share/doc/proftmb/examples/1fep_A.f.4.Q.gz
/usr/share/doc/proftmb/examples/1prn.f.5.Q.gz
/usr/share/doc/proftmb/examples/1qd5_A.f.6.Q.gz
/usr/share/doc/proftmb/examples/1qj9_A.f.7.Q.gz
/usr/share/doc/proftmb/examples/1qjp_A.f.8.Q.gz
/usr/share/doc/proftmb/examples/CADN_HUMAN.Q.gz
/usr/share/doc/proftmb/examples/YQIB_ECOLI.Q.gz
/usr/share/doc/proftmb/examples/example.Q
/usr/share/doc/proftmb/examples/example_dat.txt.gz
/usr/share/doc/proftmb/examples/example_proftmb_pretty.txt
/usr/share/doc/proftmb/examples/example_proftmb_tabular.txt
/usr/share/man/man1/proftmb.1.gz
/usr/share/proftmb/Makefile
/usr/share/proftmb/Makefile.am
/usr/share/proftmb/Makefile.in
/usr/share/proftmb/ModelArchitecture
/usr/share/proftmb/NCBIGnegComp
/usr/share/proftmb/ReduxDecode4
/usr/share/proftmb/StateRedux4
/usr/share/proftmb/StrandStates
/usr/share/proftmb/Swiss8.arch
/usr/share/proftmb/Swiss8.params
/usr/share/proftmb/Swiss_Zcurve
/usr/share/proftmb/TrainedParams
/usr/share/proftmb/ZCalibration
/usr/share/proftmb/bact.comp
/usr/share/proftmb/options
/usr/share/proftmb/proftmb.opt

Changelog

2015-12-07 - Andreas Tille <tille@debian.org>
proftmb (1.1.12-3) unstable; urgency=medium
[ Bas Couwenberg ]
* Update build dependencies for GSL 2, change libgsl0-dev to libgsl-dev.
Closes: #807222
[ Andreas Tille ]
* cme fix dpkg-control
* DEP5 fix
2014-06-03 - Andreas Tille <tille@debian.org>
proftmb (1.1.12-2) unstable; urgency=medium
[ Andreas Tille ]
* moved debian/upstream to debian/upstream/metadata
[ Cyril Brulebois ]
* Replace 'dnl' with '#' in src/Makefile.{am,in} (Closes: #750165).
[ Andreas Tille ]
* cme fix dpkg-control
* Priority: optional
* debhelper 9
* simplify debian/rules
2012-09-20 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.12-1) unstable; urgency=low
* New upstream release.
2012-09-04 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.11-1) unstable; urgency=low
* Added debug package.
* New upstream release.
2012-02-20 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.10-1) unstable; urgency=low
* New upstream release
2012-02-17 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.9-1) unstable; urgency=low
* New upstream release
2012-02-15 - Laszlo Kajan <lkajan@rostlab.org>
proftmb (1.1.8-1) unstable; urgency=low
* Initial release (Closes: #659964)

See Also

Package Description
proftpd-basic_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - binaries
proftpd-dev_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - development files
proftpd-doc_1.3.5a-1build1_all.deb Versatile, virtual-hosting FTP daemon - documentation
proftpd-mod-autohost_0.4-1build5_amd64.deb ProFTPD module mod_autohost
proftpd-mod-case_0.7-1build4_amd64.deb ProFTPD module mod_case
proftpd-mod-clamav_0.10-1build5_amd64.deb ProFTPD module mod_clamav
proftpd-mod-dnsbl_0.1.5-3ubuntu4_amd64.deb ProFTPD module mod_dnsbl
proftpd-mod-fsync_0.2-1build5_amd64.deb ProFTPD module mod_fsync
proftpd-mod-geoip_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - GeoIP module
proftpd-mod-ldap_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - LDAP module
proftpd-mod-msg_0.4.1-1.1build4_amd64.deb ProFTPD module mod_msg
proftpd-mod-mysql_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - MySQL module
proftpd-mod-odbc_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - ODBC module
proftpd-mod-pgsql_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - PostgreSQL module
proftpd-mod-sqlite_1.3.5a-1build1_amd64.deb Versatile, virtual-hosting FTP daemon - SQLite3 module
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