proda_1.0-9_amd64.deb


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Description

proda - multiple alignment of protein sequences

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: proda
Package version: 1.0
Package release: 9
Package architecture: amd64
Package type: deb
Installed size: 172 B
Download size: 48.40 KB
Official Mirror: archive.ubuntu.com
ProDA is a system for automated detection and alignment of homologous regions in collections of proteins with arbitrary domain architectures. Given an input set of unaligned sequences, ProDA identifies all homologous regions appearing in one or more sequences, and returns a collection of local multiple alignments for these regions.

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    Download

    Binary package: proda_1.0-9_amd64.deb
    Source package: proda

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install proda deb package:
      # sudo apt-get install proda

    Files

    • /usr/bin/proda
    • /usr/share/doc/proda/changelog.Debian.gz
    • /usr/share/doc/proda/copyright
    • /usr/share/man/man1/proda.1.gz

    Changelog

    2016-01-11 - Andreas Tille <tille@debian.org> proda (1.0-9) unstable; urgency=low * debian/control: re-added David to uploaders, because he really wanted to remain there * moved debian/upstream to debian/upstream/metadata * cme fix dpkg-control * DEP5 * propagate hardening options

    2012-03-29 - Andreas Tille <tille@debian.org> proda (1.0-8) unstable; urgency=low [ Charles Plessy ] * Documented information in ‘debian/upstream’. * Removed mention of the bibliographic reference in ‘debian/control’. [ Andreas Tille ] * debian/control: - Replaced David Paleino as Uploader by myself because David seems to have dropped his name from all Debian Med packages - Standards-Version: 3.9.3 (no changes needed) - Fixed Vcs fields - Dropped quilt and cdbs from Build-Depends * debian/source/format: 3.0 (quilt) * debian/rules: short dh format

    2008-07-04 - Charles Plessy <plessy@debian.org> proda (1.0-7) unstable; urgency=low * debian/rules: swiched to CDBS (Closes: #486959). This delegates the support of parallel building to CDBS. * debian/control: - Added build-dependancy on CDBS. - Reverted to Standards-Version 3.7.3 because of lack of `debian/README.source' to explain the patch system.

    2008-06-26 - Charles Plessy <plessy@debian.org> proda (1.0-6) unstable; urgency=low * debian/patches/*.patch: documented and forwarded upstream. * debian/patches/03-fix_FTBFS_gcc4.3_missing_includes.patch: Added `include <cstdio>' to `AlignedFragment.h' (Closes: #486959). * debian/copyright: - Updated to the latest version of the machine-readable format. - Relicenced packaging to 'same as Proda itself'. - Added myself to the Hall of Fame. * debian/control: added myself as uploader.

    2008-06-11 - David Paleino <d.paleino@gmail.com> proda (1.0-5) unstable; urgency=low Maintenance release. [ Charles Plessy ] * debian/proda.1.xml, debian/rules: semicosmetic change to indicate the path to the XSL stylesheet from within the XML source. [ David Paleino ] * debian/copyright updated to a machine-readable format. * debian/copyright-old removed * debian/control: - updated Standards-Version to 3.8.0 + enabled parallel building in debian/rules - updated debhelper dependency on >= 6 (also debian/compat)

    2007-12-16 - David Paleino <d.paleino@gmail.com> proda (1.0-4) unstable; urgency=low * debian/patches - switching to quilt: - DPATCH: - 00list removed - 01-fix_gcc4.3_warnings.dpatch removed - 02-fix_CXXFLAGS.dpatch removed - QUILT: - series added - 01-fix_gcc4.3_warnings.patch added - 02-fix_CXXFLAGS.patch added - 03-fix_FTBFS_gcc4.3_missing_includes.patch added (closes: #455269) * debian/control - B-D updated, switching to quilt * debian/rules: - patch system updated, switching to quilt - adding "manpages" and "proda.1" rules for easier generation of the manpage in the future * debian/manpage.xml moved to debian/proda.1.xml * Updated Standards-Version to 3.7.3

    2007-09-30 - David Paleino <d.paleino@gmail.com> proda (1.0-3) unstable; urgency=low [ Charles Plessy ] * Moved the Homepage: field out from the package's description. [ David Paleino ] * CXXFLAGS are no more hardcoded into the Makefile (added debian/patches/02-fix_CXXFLAGS.dpatch) * debian/control: removing dependencies for manpage generation - it is static now (there's no point in building always the same manpage on different archs) * debian/proda.1 added * debian/manpage.xml removed * debian/rules edited to reflect the changes above

    2007-04-25 - David Paleino <d.paleino@gmail.com> proda (1.0-2) unstable; urgency=low * Fixed gcc4.3 warnings

    2007-04-24 - David Paleino <d.paleino@gmail.com> proda (1.0-1) unstable; urgency=low * Initial release (Closes: #408347)

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