prime-phylo - bayesian estimation of gene trees taking the species tree into account

Property Value
Distribution Ubuntu 16.04 LTS (Xenial Xerus)
Repository Ubuntu Universe amd64
Package name prime-phylo
Package version 1.0.11
Package release 2build2
Package architecture amd64
Package type deb
Installed size 3.25 KB
Download size 834.28 KB
Official Mirror
PrIME (Probabilistic Integrated Models of Evolution) is a package
supporting inference of evolutionary parameters in a Bayesian framework
using Markov chain Monte Carlo simulation. A distinguishing feature of
PrIME is that the species tree is taken into account when analyzing gene
The input data to PrIME is a multiple sequence alignment in FASTA format
and the output data contains trees in Newick format.


Package Version Architecture Repository
prime-phylo_1.0.11-2build2_i386.deb 1.0.11 i386 Ubuntu Universe
prime-phylo - - -


Name Value -
libblas3 -
libboost-mpi1.58.0 -
libboost-serialization1.58.0 -
libc6 >= 2.14
libgcc1 >= 1:4.0 -
liblapack3 -
libopenmpi1.10 -
libstdc++6 >= 5.2
libxml2 >= 2.7.4
perl -


Type URL
Binary Package prime-phylo_1.0.11-2build2_amd64.deb
Source Package prime-phylo

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install prime-phylo deb package:
    # sudo apt-get install prime-phylo




2016-02-07 - Matthias Klose <>
prime-phylo (1.0.11-2build2) xenial; urgency=medium
* No-change rebuild for openmpi transition.
2015-08-28 - Matthias Klose <>
prime-phylo (1.0.11-2build1) wily; urgency=medium
* No-change rebuild using boost 1.58.
2014-10-17 - Andreas Tille <>
prime-phylo (1.0.11-2) unstable; urgency=medium
* Add missing Vcs fields.
* cme fix dpkg-control
* Move debian/upstream to debian/upstream/metadata
2012-12-17 - Erik Sjolund <>
prime-phylo (1.0.11-1) unstable; urgency=low
* Initial release (Closes: #684039)

See Also

Package Description
primer3_2.3.6-1_amd64.deb Tool to design flanking oligo nucleotides for DNA amplification
primesieve-bin_5.6.0+ds-1_amd64.deb fast prime number generator C/C++ library -- bin
primesieve-doc_5.6.0+ds-1_all.deb fast prime number generator C/C++ library -- doc
primesieve_5.6.0+ds-1_amd64.deb fast prime number generator C/C++ library
primrose_6+dfsg1-3_amd64.deb compelling tile-placement puzzle game
primus-libs_0~20150328-1_amd64.deb Shared libraries for primus
primus_0~20150328-1_amd64.deb client-side GPU offloading for NVIDIA Optimus
print-manager_15.12.3-0ubuntu1_amd64.deb printer configuration and monitoring tools
printer-driver-all-enforce_0.20140714build1_all.deb printer drivers metapackage - enforcing version
printer-driver-all_0.20140714build1_all.deb printer drivers metapackage
printer-driver-c2050_0.3b-6_amd64.deb printer driver for Lexmark 2050 Color Jetprinter
printer-driver-cjet_0.8.9-6_amd64.deb printer driver for Canon LBP laser printers
printer-driver-cups-pdf_2.6.1-21_amd64.deb printer driver for PDF writing via CUPS
printer-driver-dymo_1.4.0-5_amd64.deb printer driver for DYMO label printers
printer-driver-escpr_1.6.3-2_amd64.deb printer driver for Epson Inkjet that use ESC/P-R