predictnls_1.0.20-2_all.deb


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Description

predictnls - prediction and analysis of protein nuclear localization signals

Distribution: Ubuntu 16.04 LTS (Xenial Xerus)
Repository: Ubuntu Universe amd64
Package name: predictnls
Package version: 1.0.20
Package release: 2
Package architecture: all
Package type: deb
Installed size: 4.48 KB
Download size: 1.34 MB
Official Mirror: archive.ubuntu.com
predictnls is a method for the prediction and analysis of protein nuclear localization signals (NLS). In addition to reporting the positions of NLSs found, predictnls also gives short statistics.

Alternatives

Requires

    Download

    Source package: predictnls

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install predictnls deb package:
      # sudo apt-get install predictnls

    Files

    • /usr/bin/predictnls
    • /usr/share/doc/predictnls/README
    • /usr/share/doc/predictnls/changelog.Debian.gz
    • /usr/share/doc/predictnls/copyright
    • /usr/share/doc/predictnls/examples/O49931.fa
    • /usr/share/doc/predictnls/examples/O49931.nls
    • /usr/share/man/man1/predictnls.1.gz
    • /usr/share/predictnls/grep_NLS_update.pl
    • /usr/share/predictnls/predictnlsrc.default
    • /usr/share/predictnls/data/DnaMotifBigStat
    • /usr/share/predictnls/data/DnaMotifStat
    • /usr/share/predictnls/data/DnaNlsList
    • /usr/share/predictnls/data/ExptNls.rdb
    • /usr/share/predictnls/data/ExptNlsList
    • /usr/share/predictnls/data/Full_NLS_list
    • /usr/share/predictnls/data/Loci.dat
    • /usr/share/predictnls/data/My_NLS_list
    • /usr/share/predictnls/data/NLS_List
    • /usr/share/predictnls/data/NewProtList
    • /usr/share/predictnls/data/OutOfTree
    • /usr/share/predictnls/data/Papers_NLS.dat
    • /usr/share/predictnls/data/allProt.fasta
    • /usr/share/predictnls/data/nlsTree
    • /usr/share/predictnls/data/prot_list

    Changelog

    2016-01-11 - Andreas Tille <tille@debian.org> predictnls (1.0.20-2) unstable; urgency=medium * Add myself to Uploaders * Moved debian/upstream to debian/upstream/metadata * cme fix dpkg-control * Priority: optional * debhelper 9 * DEP5

    2012-07-10 - Julia Ertl <ertlj@in.tum.de> predictnls (1.0.20-1) unstable; urgency=low * initial release (Closes: #681271)

    2011-06-03 - Laszlo Kajan <lkajan@rostlab.org> predictnls (1.0.18) unstable; urgency=low * fixed warnings for test sequences MNKIPIKDLLNPGAA and MNKIPIKDLLNPG * bug 39 (PredictNLS misses any NLS right at start of the protein) fixed * fixed bug 37, 38, 40: LICENSE file missing; PredictNLS start positions off by one (using zero based counting); predictNLS only reports last match for any one NLS motif

    2011-04-17 - Laszlo Kajan <lkajan@rostlab.org> predictnls (1.0.17) unstable; urgency=low * better error reporting around line 301

    2011-02-18 - Laszlo Kajan <lkajan@rostlab.org> predictnls (1.0.16) unstable; urgency=low * bugzilla url * popularity contest

    2010-11-04 - Guy Yachdav <gyachdav@rostlab.org> predictnls (1.0.15) stable; urgency=low * Changed references to online help

    2010-10-13 - Laszlo Kajan <lkajan@rostlab.org> predictnls (1.0.14) stable; urgency=low * fixed perl warning

    2010-10-13 - Laszlo Kajan <lkajan@rostlab.org> predictnls (1.0.13) stable; urgency=low * fixed deletion of output file bug

    2010-10-13 - Laszlo Kajan <lkajan@rostlab.org> predictnls (1.0.12) stable; urgency=low * added nlsdat option to extract non-html nls prediction along with the html * fixed html report table

    2010-09-25 - Laszlo Kajan <lkajan@rostlab.org> predictnls (1.0.11) stable; urgency=low * Fixed temporary dir missing '/' bug

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