Description
plast - Parallel Local Sequence Alignment Search Tool
| Property | Value |
|---|---|
| Distribution | Ubuntu 16.04 LTS (Xenial Xerus) |
| Repository | Ubuntu Universe amd64 |
| Package name | plast |
| Package version | 2.3.1+dfsg |
| Package release | 2 |
| Package architecture | amd64 |
| Package type | deb |
| Installed size | 1.65 KB |
| Download size | 559.02 KB |
| Official Mirror | archive.ubuntu.com |
PLAST is a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds- based heuristic comparison methods, such as the Blast suite of algorithms. Relying on unique software architecture, PLAST takes full advantage of recent multi-core personal computers without requiring any additional hardware devices.
Alternatives
| Package | Version | Architecture | Repository |
|---|---|---|---|
| plast | - | - | - |
Requires
| Name | Value |
|---|---|
| libc6 | >= 2.14 |
| libgcc1 | >= 1:3.0 |
| libpcre3 | - |
| libstdc++6 | >= 5.2 |
Download
| Type | URL |
|---|---|
| Binary Package | plast_2.3.1+dfsg-2_amd64.deb |
| Source Package | plast |
Install Howto
- Update the package index:
# sudo apt-get update - Install plast deb package:
# sudo apt-get install plast
Files
| Path |
|---|
| /usr/bin/plast |
| /usr/lib/plast/bin/plast |
| /usr/share/doc/plast/README |
| /usr/share/doc/plast/README.test |
| /usr/share/doc/plast/changelog.Debian.gz |
| /usr/share/doc/plast/copyright |
| /usr/share/man/man1/plast.1.gz |
Changelog
2016-02-10 - Andreas Tille <tille@debian.org> plast (2.3.1+dfsg-2) unstable; urgency=medium * Make sure wrapper script is calling bash * Restrict to architectures featuring SSE Closes: #814299 * Fix spelling * Add Upstream-Contact
2016-02-09 - Andreas Tille <tille@debian.org> plast (2.3.1+dfsg-1) unstable; urgency=medium * Initial release (Closes: #814261)
See Also
| Package | Description |
|---|---|
| plastimatch_1.6.2+dfsg-3ubuntu1_amd64.deb | medical image reconstruction and registration |
| playitslowly_1.5.0-0.1_all.deb | Plays back audio files at a different speed or pitch |
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| plee-the-bear-data_0.6.0-3.1build1_all.deb | data for Plee the Bear |
| plee-the-bear_0.6.0-3.1build1_amd64.deb | 2D platform game |
| pleiades_1.6.0-3_all.deb | Japanese translation plug-in for Eclipse using dynamic AOP |
| plink1.9_1.90~b3.31-160203-1_amd64.deb | whole-genome association analysis toolset |
| plink_1.07-6_amd64.deb | whole-genome association analysis toolset |
| plinth_0.8.1-1_all.deb | web front end for administering every aspect of a FreedomBox |
| plm_2.6+repack-2_all.deb | Programming exerciser in Java, Python, Scala and others |
| ploop_1.14.1-1_amd64.deb | tools to work with ploop devices and images |
| plopfolio.app_0.1.0-6build4_amd64.deb | Personal dashboard for GNUstep |
| plotdrop_0.5.2-3ubuntu1_amd64.deb | A minimal GNOME frontend to GNUPlot |
| ploticus_2.42-3_amd64.deb | script driven business graphics package |
| plotnetcfg_0.4.1-1_amd64.deb | local networking configuration diagram plotter |
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